Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2271 and Dsui_2272 are separated by 215 nucleotides Dsui_2272 and Dsui_2273 are separated by 55 nucleotides
Dsui_2271: Dsui_2271 - hypothetical protein, at 2,421,748 to 2,422,731
_2271
Dsui_2272: Dsui_2272 - hypothetical protein, at 2,422,947 to 2,424,431
_2272
Dsui_2273: Dsui_2273 - TonB-dependent siderophore receptor, at 2,424,487 to 2,426,691
_2273
Position (kb)
2422
2423
2424
2425 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2422.011 kb on + strand at 2422.050 kb on + strand, within Dsui_2271 at 2422.066 kb on - strand, within Dsui_2271 at 2422.133 kb on - strand, within Dsui_2271 at 2422.287 kb on + strand, within Dsui_2271 at 2422.302 kb on + strand, within Dsui_2271 at 2422.310 kb on - strand, within Dsui_2271 at 2422.339 kb on + strand at 2422.417 kb on + strand at 2422.453 kb on - strand, within Dsui_2271 at 2422.559 kb on - strand, within Dsui_2271 at 2422.574 kb on + strand at 2422.611 kb on + strand at 2422.637 kb on + strand at 2422.730 kb on - strand at 2422.741 kb on + strand at 2422.776 kb on + strand at 2422.950 kb on + strand at 2423.020 kb on - strand at 2423.159 kb on + strand at 2423.167 kb on - strand, within Dsui_2272 at 2423.173 kb on - strand at 2423.244 kb on - strand, within Dsui_2272 at 2423.263 kb on - strand, within Dsui_2272 at 2423.279 kb on - strand, within Dsui_2272 at 2423.561 kb on + strand at 2423.651 kb on + strand at 2423.762 kb on - strand at 2423.844 kb on - strand, within Dsui_2272 at 2423.867 kb on + strand at 2424.259 kb on - strand, within Dsui_2272 at 2424.279 kb on + strand at 2424.295 kb on + strand at 2424.327 kb on - strand at 2424.425 kb on - strand at 2424.518 kb on - strand at 2424.566 kb on + strand at 2424.574 kb on - strand at 2424.623 kb on + strand at 2424.631 kb on - strand at 2424.709 kb on - strand, within Dsui_2273 at 2424.812 kb on - strand, within Dsui_2273 at 2424.836 kb on - strand, within Dsui_2273 at 2425.032 kb on - strand, within Dsui_2273 at 2425.381 kb on - strand, within Dsui_2273
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 2,422,011 + -0.8 2,422,050 + Dsui_2271 0.31 -4.0 2,422,066 - Dsui_2271 0.32 +0.1 2,422,133 - Dsui_2271 0.39 -0.2 2,422,287 + Dsui_2271 0.55 -3.3 2,422,302 + Dsui_2271 0.56 -1.3 2,422,310 - Dsui_2271 0.57 -0.5 2,422,339 + +1.9 2,422,417 + -0.1 2,422,453 - Dsui_2271 0.72 +0.4 2,422,559 - Dsui_2271 0.82 +1.0 2,422,574 + -1.4 2,422,611 + -0.4 2,422,637 + -1.0 2,422,730 - +1.9 2,422,741 + +1.4 2,422,776 + -0.7 2,422,950 + -2.1 2,423,020 - -1.1 2,423,159 + -1.7 2,423,167 - Dsui_2272 0.15 -1.5 2,423,173 - +2.6 2,423,244 - Dsui_2272 0.20 -1.7 2,423,263 - Dsui_2272 0.21 -2.4 2,423,279 - Dsui_2272 0.22 -0.3 2,423,561 + -1.4 2,423,651 + +1.3 2,423,762 - -1.2 2,423,844 - Dsui_2272 0.60 -1.1 2,423,867 + -1.2 2,424,259 - Dsui_2272 0.88 -1.7 2,424,279 + +0.2 2,424,295 + -1.8 2,424,327 - +0.0 2,424,425 - -0.2 2,424,518 - +1.7 2,424,566 + -3.4 2,424,574 - +1.1 2,424,623 + -1.0 2,424,631 - -0.5 2,424,709 - Dsui_2273 0.10 -0.9 2,424,812 - Dsui_2273 0.15 -0.5 2,424,836 - Dsui_2273 0.16 -1.9 2,425,032 - Dsui_2273 0.25 -2.7 2,425,381 - Dsui_2273 0.41 -0.7
Or see this region's nucleotide sequence