Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2152 and Dsui_2153 are separated by 9 nucleotides Dsui_2153 and Dsui_2154 are separated by 27 nucleotides Dsui_2154 and Dsui_2155 are separated by 269 nucleotides
Dsui_2152: Dsui_2152 - molybdenum cofactor synthesis domain protein, at 2,282,686 to 2,283,912
_2152
Dsui_2153: Dsui_2153 - molybdopterin converting factor, subunit 1, at 2,283,922 to 2,284,173
_2153
Dsui_2154: Dsui_2154 - molybdopterin converting factor, large subunit, at 2,284,201 to 2,284,662
_2154
Dsui_2155: Dsui_2155 - hypothetical protein, at 2,284,932 to 2,285,822
_2155
Position (kb)
2284
2285 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2283.255 kb on - strand at 2283.293 kb on - strand, within Dsui_2152 at 2283.343 kb on - strand at 2283.570 kb on - strand, within Dsui_2152 at 2283.741 kb on + strand, within Dsui_2152 at 2283.768 kb on - strand, within Dsui_2152 at 2283.801 kb on + strand at 2283.901 kb on + strand at 2283.909 kb on - strand at 2283.909 kb on - strand at 2283.966 kb on - strand, within Dsui_2153 at 2283.991 kb on + strand, within Dsui_2153 at 2284.104 kb on + strand, within Dsui_2153 at 2284.454 kb on - strand, within Dsui_2154 at 2284.462 kb on - strand, within Dsui_2154 at 2284.491 kb on + strand, within Dsui_2154 at 2284.793 kb on + strand at 2284.988 kb on + strand at 2285.062 kb on + strand, within Dsui_2155 at 2285.078 kb on - strand, within Dsui_2155 at 2285.107 kb on + strand at 2285.107 kb on + strand, within Dsui_2155 at 2285.161 kb on - strand, within Dsui_2155 at 2285.307 kb on - strand at 2285.358 kb on + strand, within Dsui_2155 at 2285.366 kb on - strand at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.502 kb on - strand, within Dsui_2155 at 2285.563 kb on + strand, within Dsui_2155 at 2285.621 kb on + strand, within Dsui_2155
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 2,283,255 - -3.5 2,283,293 - Dsui_2152 0.49 -3.0 2,283,343 - +0.1 2,283,570 - Dsui_2152 0.72 -3.2 2,283,741 + Dsui_2152 0.86 -2.6 2,283,768 - Dsui_2152 0.88 -4.7 2,283,801 + -2.5 2,283,901 + -3.6 2,283,909 - -3.1 2,283,909 - -2.1 2,283,966 - Dsui_2153 0.17 -4.4 2,283,991 + Dsui_2153 0.27 -3.4 2,284,104 + Dsui_2153 0.72 -3.5 2,284,454 - Dsui_2154 0.55 -1.2 2,284,462 - Dsui_2154 0.56 -3.4 2,284,491 + Dsui_2154 0.63 -3.6 2,284,793 + -0.7 2,284,988 + +0.3 2,285,062 + Dsui_2155 0.15 +1.1 2,285,078 - Dsui_2155 0.16 +0.6 2,285,107 + -1.2 2,285,107 + Dsui_2155 0.20 +0.3 2,285,161 - Dsui_2155 0.26 -2.2 2,285,307 - -0.5 2,285,358 + Dsui_2155 0.48 +0.0 2,285,366 - -0.4 2,285,502 - Dsui_2155 0.64 -2.2 2,285,502 - Dsui_2155 0.64 -0.1 2,285,502 - Dsui_2155 0.64 -0.1 2,285,502 - Dsui_2155 0.64 -0.9 2,285,502 - Dsui_2155 0.64 +0.1 2,285,563 + Dsui_2155 0.71 -1.5 2,285,621 + Dsui_2155 0.77 -0.5
Or see this region's nucleotide sequence