Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2105 and Dsui_2106 are separated by 93 nucleotides Dsui_2106 and Dsui_2107 are separated by 573 nucleotides
Dsui_2105: Dsui_2105 - transposase, at 2,227,868 to 2,229,358
_2105
Dsui_2106: Dsui_2106 - hypothetical protein, at 2,229,452 to 2,229,871
_2106
Dsui_2107: Dsui_2107 - hypothetical protein, at 2,230,445 to 2,231,428
_2107
Position (kb)
2229
2230 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2229.467 kb on + strand at 2229.467 kb on + strand at 2229.467 kb on + strand at 2229.467 kb on + strand at 2229.527 kb on + strand, within Dsui_2106 at 2229.556 kb on - strand, within Dsui_2106 at 2229.569 kb on - strand, within Dsui_2106 at 2229.587 kb on + strand, within Dsui_2106 at 2229.587 kb on + strand, within Dsui_2106 at 2229.595 kb on - strand, within Dsui_2106 at 2229.595 kb on - strand, within Dsui_2106 at 2229.595 kb on - strand, within Dsui_2106 at 2229.595 kb on - strand, within Dsui_2106 at 2229.595 kb on - strand, within Dsui_2106 at 2229.600 kb on + strand, within Dsui_2106 at 2229.613 kb on - strand, within Dsui_2106 at 2229.644 kb on + strand, within Dsui_2106 at 2229.698 kb on - strand, within Dsui_2106 at 2229.703 kb on + strand, within Dsui_2106 at 2229.711 kb on - strand, within Dsui_2106 at 2229.737 kb on - strand, within Dsui_2106 at 2229.739 kb on + strand, within Dsui_2106 at 2229.747 kb on - strand, within Dsui_2106 at 2229.747 kb on - strand, within Dsui_2106 at 2229.754 kb on + strand, within Dsui_2106 at 2229.759 kb on + strand, within Dsui_2106 at 2229.759 kb on + strand at 2229.762 kb on - strand, within Dsui_2106 at 2229.767 kb on - strand, within Dsui_2106 at 2229.767 kb on - strand, within Dsui_2106 at 2229.777 kb on - strand, within Dsui_2106 at 2229.784 kb on + strand, within Dsui_2106 at 2229.820 kb on + strand, within Dsui_2106 at 2229.822 kb on - strand at 2229.846 kb on - strand at 2229.846 kb on - strand at 2229.884 kb on + strand at 2229.884 kb on + strand at 2229.892 kb on - strand at 2229.894 kb on + strand at 2229.902 kb on - strand at 2229.922 kb on - strand at 2229.951 kb on - strand at 2229.970 kb on - strand at 2229.974 kb on + strand at 2229.974 kb on + strand at 2229.982 kb on - strand at 2229.982 kb on - strand at 2229.982 kb on - strand at 2230.000 kb on + strand at 2230.004 kb on - strand at 2230.018 kb on + strand at 2230.104 kb on + strand at 2230.126 kb on + strand at 2230.130 kb on - strand at 2230.130 kb on - strand at 2230.132 kb on + strand at 2230.134 kb on - strand at 2230.145 kb on - strand at 2230.149 kb on + strand at 2230.157 kb on - strand at 2230.219 kb on - strand at 2230.219 kb on - strand at 2230.219 kb on - strand at 2230.219 kb on - strand at 2230.242 kb on + strand at 2230.260 kb on - strand at 2230.300 kb on - strand at 2230.309 kb on - strand at 2230.314 kb on - strand at 2230.322 kb on - strand at 2230.349 kb on - strand at 2230.431 kb on - strand at 2230.433 kb on + strand at 2230.441 kb on - strand at 2230.441 kb on - strand at 2230.460 kb on - strand at 2230.460 kb on - strand at 2230.460 kb on - strand at 2230.460 kb on - strand at 2230.460 kb on - strand at 2230.602 kb on - strand, within Dsui_2107 at 2230.621 kb on + strand at 2230.657 kb on - strand, within Dsui_2107 at 2230.706 kb on - strand, within Dsui_2107 at 2230.710 kb on - strand, within Dsui_2107 at 2230.766 kb on - strand, within Dsui_2107 at 2230.813 kb on - strand, within Dsui_2107
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 2,229,467 + +0.1 2,229,467 + -0.5 2,229,467 + +0.9 2,229,467 + +0.2 2,229,527 + Dsui_2106 0.18 +1.1 2,229,556 - Dsui_2106 0.25 +1.2 2,229,569 - Dsui_2106 0.28 +1.0 2,229,587 + Dsui_2106 0.32 +2.4 2,229,587 + Dsui_2106 0.32 -2.5 2,229,595 - Dsui_2106 0.34 +1.8 2,229,595 - Dsui_2106 0.34 +0.2 2,229,595 - Dsui_2106 0.34 +1.7 2,229,595 - Dsui_2106 0.34 -1.4 2,229,595 - Dsui_2106 0.34 +0.2 2,229,600 + Dsui_2106 0.35 +1.0 2,229,613 - Dsui_2106 0.38 +1.2 2,229,644 + Dsui_2106 0.46 +1.2 2,229,698 - Dsui_2106 0.59 +0.6 2,229,703 + Dsui_2106 0.60 -2.5 2,229,711 - Dsui_2106 0.62 +0.9 2,229,737 - Dsui_2106 0.68 +0.7 2,229,739 + Dsui_2106 0.68 -1.6 2,229,747 - Dsui_2106 0.70 +1.6 2,229,747 - Dsui_2106 0.70 +0.7 2,229,754 + Dsui_2106 0.72 +0.1 2,229,759 + Dsui_2106 0.73 +1.6 2,229,759 + -0.4 2,229,762 - Dsui_2106 0.74 +2.4 2,229,767 - Dsui_2106 0.75 +0.4 2,229,767 - Dsui_2106 0.75 +1.4 2,229,777 - Dsui_2106 0.77 -0.0 2,229,784 + Dsui_2106 0.79 +2.6 2,229,820 + Dsui_2106 0.88 -1.7 2,229,822 - -0.4 2,229,846 - +1.4 2,229,846 - +1.0 2,229,884 + +0.2 2,229,884 + +2.0 2,229,892 - +1.6 2,229,894 + -0.3 2,229,902 - +1.7 2,229,922 - +0.5 2,229,951 - +0.4 2,229,970 - +0.6 2,229,974 + +1.2 2,229,974 + -1.7 2,229,982 - +1.5 2,229,982 - -0.5 2,229,982 - +0.8 2,230,000 + +1.2 2,230,004 - -0.2 2,230,018 + -0.2 2,230,104 + -1.4 2,230,126 + +0.6 2,230,130 - +0.6 2,230,130 - +1.5 2,230,132 + +1.4 2,230,134 - +1.1 2,230,145 - +0.4 2,230,149 + -1.4 2,230,157 - +0.0 2,230,219 - +0.0 2,230,219 - +1.3 2,230,219 - -0.5 2,230,219 - +0.3 2,230,242 + -1.3 2,230,260 - +0.7 2,230,300 - +0.6 2,230,309 - +0.9 2,230,314 - +0.7 2,230,322 - +0.9 2,230,349 - +0.6 2,230,431 - +0.9 2,230,433 + -1.2 2,230,441 - +2.2 2,230,441 - +0.1 2,230,460 - +1.4 2,230,460 - +1.1 2,230,460 - +1.0 2,230,460 - +1.0 2,230,460 - +0.2 2,230,602 - Dsui_2107 0.16 +1.0 2,230,621 + +3.5 2,230,657 - Dsui_2107 0.22 +1.0 2,230,706 - Dsui_2107 0.27 +0.9 2,230,710 - Dsui_2107 0.27 +1.3 2,230,766 - Dsui_2107 0.33 +0.9 2,230,813 - Dsui_2107 0.37 +1.1
Or see this region's nucleotide sequence