Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1476 and Dsui_1477 overlap by 4 nucleotides Dsui_1477 and Dsui_1478 overlap by 4 nucleotides
Dsui_1476: Dsui_1476 - hypothetical protein, at 1,538,774 to 1,540,891
_1476
Dsui_1477: Dsui_1477 - hypothetical protein, at 1,540,888 to 1,543,035
_1477
Dsui_1478: Dsui_1478 - hypothetical protein, at 1,543,032 to 1,543,517
_1478
Position (kb)
1540
1541
1542
1543
1544 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1539.898 kb on - strand, within Dsui_1476 at 1539.907 kb on + strand, within Dsui_1476 at 1539.909 kb on + strand, within Dsui_1476 at 1539.917 kb on + strand, within Dsui_1476 at 1539.917 kb on - strand, within Dsui_1476 at 1539.922 kb on + strand, within Dsui_1476 at 1540.003 kb on + strand, within Dsui_1476 at 1540.026 kb on - strand, within Dsui_1476 at 1540.043 kb on - strand, within Dsui_1476 at 1540.045 kb on - strand, within Dsui_1476 at 1540.063 kb on + strand, within Dsui_1476 at 1540.089 kb on - strand, within Dsui_1476 at 1540.137 kb on + strand, within Dsui_1476 at 1540.177 kb on + strand, within Dsui_1476 at 1540.231 kb on - strand, within Dsui_1476 at 1540.316 kb on + strand, within Dsui_1476 at 1540.351 kb on + strand, within Dsui_1476 at 1540.459 kb on + strand, within Dsui_1476 at 1540.564 kb on + strand, within Dsui_1476 at 1540.611 kb on + strand, within Dsui_1476 at 1540.613 kb on + strand, within Dsui_1476 at 1540.804 kb on - strand at 1540.835 kb on + strand at 1540.880 kb on + strand at 1540.956 kb on + strand at 1540.972 kb on - strand at 1541.005 kb on + strand at 1541.010 kb on + strand at 1541.013 kb on - strand at 1541.117 kb on - strand, within Dsui_1477 at 1541.143 kb on - strand, within Dsui_1477 at 1541.165 kb on - strand, within Dsui_1477 at 1541.259 kb on - strand, within Dsui_1477 at 1541.263 kb on - strand, within Dsui_1477 at 1541.276 kb on + strand, within Dsui_1477 at 1541.288 kb on + strand, within Dsui_1477 at 1541.477 kb on - strand, within Dsui_1477 at 1541.505 kb on + strand, within Dsui_1477 at 1541.522 kb on - strand, within Dsui_1477 at 1541.537 kb on + strand, within Dsui_1477 at 1541.545 kb on - strand, within Dsui_1477 at 1541.609 kb on - strand, within Dsui_1477 at 1541.721 kb on - strand, within Dsui_1477 at 1541.748 kb on + strand, within Dsui_1477 at 1541.774 kb on + strand, within Dsui_1477 at 1541.849 kb on + strand, within Dsui_1477 at 1541.988 kb on - strand, within Dsui_1477 at 1542.021 kb on - strand, within Dsui_1477 at 1542.031 kb on - strand, within Dsui_1477 at 1542.106 kb on - strand, within Dsui_1477 at 1542.198 kb on - strand, within Dsui_1477 at 1542.208 kb on - strand, within Dsui_1477 at 1542.240 kb on - strand, within Dsui_1477 at 1542.263 kb on + strand, within Dsui_1477 at 1542.325 kb on - strand, within Dsui_1477 at 1542.357 kb on + strand, within Dsui_1477 at 1542.407 kb on - strand, within Dsui_1477 at 1542.437 kb on + strand, within Dsui_1477 at 1542.473 kb on + strand, within Dsui_1477 at 1542.481 kb on - strand, within Dsui_1477 at 1542.606 kb on + strand, within Dsui_1477 at 1542.809 kb on + strand, within Dsui_1477 at 1542.907 kb on - strand at 1542.907 kb on - strand at 1542.999 kb on + strand at 1543.043 kb on + strand at 1543.051 kb on - strand at 1543.171 kb on - strand, within Dsui_1478 at 1543.500 kb on - strand at 1543.628 kb on - strand at 1543.776 kb on - strand at 1543.859 kb on - strand at 1543.943 kb on - strand at 1543.961 kb on - strand at 1543.964 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 1,539,898 - Dsui_1476 0.53 +1.0 1,539,907 + Dsui_1476 0.53 +0.6 1,539,909 + Dsui_1476 0.54 +0.6 1,539,917 + Dsui_1476 0.54 +1.1 1,539,917 - Dsui_1476 0.54 +1.1 1,539,922 + Dsui_1476 0.54 -0.1 1,540,003 + Dsui_1476 0.58 +0.7 1,540,026 - Dsui_1476 0.59 +1.8 1,540,043 - Dsui_1476 0.60 +0.5 1,540,045 - Dsui_1476 0.60 +0.9 1,540,063 + Dsui_1476 0.61 +1.9 1,540,089 - Dsui_1476 0.62 +1.4 1,540,137 + Dsui_1476 0.64 +1.0 1,540,177 + Dsui_1476 0.66 +1.5 1,540,231 - Dsui_1476 0.69 +1.5 1,540,316 + Dsui_1476 0.73 +1.0 1,540,351 + Dsui_1476 0.74 +1.0 1,540,459 + Dsui_1476 0.80 +1.1 1,540,564 + Dsui_1476 0.85 +1.6 1,540,611 + Dsui_1476 0.87 +1.3 1,540,613 + Dsui_1476 0.87 -1.0 1,540,804 - -1.3 1,540,835 + +1.1 1,540,880 + -0.8 1,540,956 + +1.3 1,540,972 - +1.0 1,541,005 + +1.6 1,541,010 + +1.0 1,541,013 - +0.8 1,541,117 - Dsui_1477 0.11 +0.8 1,541,143 - Dsui_1477 0.12 +0.5 1,541,165 - Dsui_1477 0.13 +1.4 1,541,259 - Dsui_1477 0.17 +1.8 1,541,263 - Dsui_1477 0.17 +1.0 1,541,276 + Dsui_1477 0.18 +1.0 1,541,288 + Dsui_1477 0.19 +1.1 1,541,477 - Dsui_1477 0.27 -1.2 1,541,505 + Dsui_1477 0.29 +1.5 1,541,522 - Dsui_1477 0.30 -0.5 1,541,537 + Dsui_1477 0.30 +1.7 1,541,545 - Dsui_1477 0.31 -0.3 1,541,609 - Dsui_1477 0.34 -0.5 1,541,721 - Dsui_1477 0.39 +0.6 1,541,748 + Dsui_1477 0.40 +0.8 1,541,774 + Dsui_1477 0.41 +1.1 1,541,849 + Dsui_1477 0.45 +1.3 1,541,988 - Dsui_1477 0.51 -0.4 1,542,021 - Dsui_1477 0.53 +0.2 1,542,031 - Dsui_1477 0.53 -1.1 1,542,106 - Dsui_1477 0.57 +0.7 1,542,198 - Dsui_1477 0.61 +0.4 1,542,208 - Dsui_1477 0.61 +0.1 1,542,240 - Dsui_1477 0.63 -1.0 1,542,263 + Dsui_1477 0.64 +2.2 1,542,325 - Dsui_1477 0.67 +0.2 1,542,357 + Dsui_1477 0.68 +0.9 1,542,407 - Dsui_1477 0.71 +1.8 1,542,437 + Dsui_1477 0.72 +1.1 1,542,473 + Dsui_1477 0.74 +1.2 1,542,481 - Dsui_1477 0.74 +2.1 1,542,606 + Dsui_1477 0.80 +0.7 1,542,809 + Dsui_1477 0.89 +1.1 1,542,907 - -0.0 1,542,907 - -1.7 1,542,999 + +1.3 1,543,043 + +1.2 1,543,051 - +0.6 1,543,171 - Dsui_1478 0.29 +1.0 1,543,500 - +0.2 1,543,628 - -2.4 1,543,776 - +1.5 1,543,859 - +0.8 1,543,943 - +1.2 1,543,961 - +0.6 1,543,964 - +1.2
Or see this region's nucleotide sequence