Strain Fitness in Dechlorosoma suillum PS around Dsui_1477

Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1476 and Dsui_1477 overlap by 4 nucleotidesDsui_1477 and Dsui_1478 overlap by 4 nucleotides Dsui_1476: Dsui_1476 - hypothetical protein, at 1,538,774 to 1,540,891 _1476 Dsui_1477: Dsui_1477 - hypothetical protein, at 1,540,888 to 1,543,035 _1477 Dsui_1478: Dsui_1478 - hypothetical protein, at 1,543,032 to 1,543,517 _1478 Position (kb) 1540 1541 1542 1543 1544Strain fitness (log2 ratio) -2 -1 0 1 2at 1539.898 kb on - strand, within Dsui_1476at 1539.907 kb on + strand, within Dsui_1476at 1539.909 kb on + strand, within Dsui_1476at 1539.917 kb on + strand, within Dsui_1476at 1539.917 kb on - strand, within Dsui_1476at 1539.922 kb on + strand, within Dsui_1476at 1540.003 kb on + strand, within Dsui_1476at 1540.026 kb on - strand, within Dsui_1476at 1540.043 kb on - strand, within Dsui_1476at 1540.045 kb on - strand, within Dsui_1476at 1540.063 kb on + strand, within Dsui_1476at 1540.089 kb on - strand, within Dsui_1476at 1540.137 kb on + strand, within Dsui_1476at 1540.177 kb on + strand, within Dsui_1476at 1540.231 kb on - strand, within Dsui_1476at 1540.316 kb on + strand, within Dsui_1476at 1540.351 kb on + strand, within Dsui_1476at 1540.459 kb on + strand, within Dsui_1476at 1540.564 kb on + strand, within Dsui_1476at 1540.611 kb on + strand, within Dsui_1476at 1540.613 kb on + strand, within Dsui_1476at 1540.804 kb on - strandat 1540.835 kb on + strandat 1540.880 kb on + strandat 1540.956 kb on + strandat 1540.972 kb on - strandat 1541.005 kb on + strandat 1541.010 kb on + strandat 1541.013 kb on - strandat 1541.117 kb on - strand, within Dsui_1477at 1541.143 kb on - strand, within Dsui_1477at 1541.165 kb on - strand, within Dsui_1477at 1541.259 kb on - strand, within Dsui_1477at 1541.263 kb on - strand, within Dsui_1477at 1541.276 kb on + strand, within Dsui_1477at 1541.288 kb on + strand, within Dsui_1477at 1541.477 kb on - strand, within Dsui_1477at 1541.505 kb on + strand, within Dsui_1477at 1541.522 kb on - strand, within Dsui_1477at 1541.537 kb on + strand, within Dsui_1477at 1541.545 kb on - strand, within Dsui_1477at 1541.609 kb on - strand, within Dsui_1477at 1541.721 kb on - strand, within Dsui_1477at 1541.748 kb on + strand, within Dsui_1477at 1541.774 kb on + strand, within Dsui_1477at 1541.849 kb on + strand, within Dsui_1477at 1541.988 kb on - strand, within Dsui_1477at 1542.021 kb on - strand, within Dsui_1477at 1542.031 kb on - strand, within Dsui_1477at 1542.106 kb on - strand, within Dsui_1477at 1542.198 kb on - strand, within Dsui_1477at 1542.208 kb on - strand, within Dsui_1477at 1542.240 kb on - strand, within Dsui_1477at 1542.263 kb on + strand, within Dsui_1477at 1542.325 kb on - strand, within Dsui_1477at 1542.357 kb on + strand, within Dsui_1477at 1542.407 kb on - strand, within Dsui_1477at 1542.437 kb on + strand, within Dsui_1477at 1542.473 kb on + strand, within Dsui_1477at 1542.481 kb on - strand, within Dsui_1477at 1542.606 kb on + strand, within Dsui_1477at 1542.809 kb on + strand, within Dsui_1477at 1542.907 kb on - strandat 1542.907 kb on - strandat 1542.999 kb on + strandat 1543.043 kb on + strandat 1543.051 kb on - strandat 1543.171 kb on - strand, within Dsui_1478at 1543.500 kb on - strandat 1543.628 kb on - strandat 1543.776 kb on - strandat 1543.859 kb on - strandat 1543.943 kb on - strandat 1543.961 kb on - strandat 1543.964 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
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1,539,898 - Dsui_1476 0.53 +1.0
1,539,907 + Dsui_1476 0.53 +0.6
1,539,909 + Dsui_1476 0.54 +0.6
1,539,917 + Dsui_1476 0.54 +1.1
1,539,917 - Dsui_1476 0.54 +1.1
1,539,922 + Dsui_1476 0.54 -0.1
1,540,003 + Dsui_1476 0.58 +0.7
1,540,026 - Dsui_1476 0.59 +1.8
1,540,043 - Dsui_1476 0.60 +0.5
1,540,045 - Dsui_1476 0.60 +0.9
1,540,063 + Dsui_1476 0.61 +1.9
1,540,089 - Dsui_1476 0.62 +1.4
1,540,137 + Dsui_1476 0.64 +1.0
1,540,177 + Dsui_1476 0.66 +1.5
1,540,231 - Dsui_1476 0.69 +1.5
1,540,316 + Dsui_1476 0.73 +1.0
1,540,351 + Dsui_1476 0.74 +1.0
1,540,459 + Dsui_1476 0.80 +1.1
1,540,564 + Dsui_1476 0.85 +1.6
1,540,611 + Dsui_1476 0.87 +1.3
1,540,613 + Dsui_1476 0.87 -1.0
1,540,804 - -1.3
1,540,835 + +1.1
1,540,880 + -0.8
1,540,956 + +1.3
1,540,972 - +1.0
1,541,005 + +1.6
1,541,010 + +1.0
1,541,013 - +0.8
1,541,117 - Dsui_1477 0.11 +0.8
1,541,143 - Dsui_1477 0.12 +0.5
1,541,165 - Dsui_1477 0.13 +1.4
1,541,259 - Dsui_1477 0.17 +1.8
1,541,263 - Dsui_1477 0.17 +1.0
1,541,276 + Dsui_1477 0.18 +1.0
1,541,288 + Dsui_1477 0.19 +1.1
1,541,477 - Dsui_1477 0.27 -1.2
1,541,505 + Dsui_1477 0.29 +1.5
1,541,522 - Dsui_1477 0.30 -0.5
1,541,537 + Dsui_1477 0.30 +1.7
1,541,545 - Dsui_1477 0.31 -0.3
1,541,609 - Dsui_1477 0.34 -0.5
1,541,721 - Dsui_1477 0.39 +0.6
1,541,748 + Dsui_1477 0.40 +0.8
1,541,774 + Dsui_1477 0.41 +1.1
1,541,849 + Dsui_1477 0.45 +1.3
1,541,988 - Dsui_1477 0.51 -0.4
1,542,021 - Dsui_1477 0.53 +0.2
1,542,031 - Dsui_1477 0.53 -1.1
1,542,106 - Dsui_1477 0.57 +0.7
1,542,198 - Dsui_1477 0.61 +0.4
1,542,208 - Dsui_1477 0.61 +0.1
1,542,240 - Dsui_1477 0.63 -1.0
1,542,263 + Dsui_1477 0.64 +2.2
1,542,325 - Dsui_1477 0.67 +0.2
1,542,357 + Dsui_1477 0.68 +0.9
1,542,407 - Dsui_1477 0.71 +1.8
1,542,437 + Dsui_1477 0.72 +1.1
1,542,473 + Dsui_1477 0.74 +1.2
1,542,481 - Dsui_1477 0.74 +2.1
1,542,606 + Dsui_1477 0.80 +0.7
1,542,809 + Dsui_1477 0.89 +1.1
1,542,907 - -0.0
1,542,907 - -1.7
1,542,999 + +1.3
1,543,043 + +1.2
1,543,051 - +0.6
1,543,171 - Dsui_1478 0.29 +1.0
1,543,500 - +0.2
1,543,628 - -2.4
1,543,776 - +1.5
1,543,859 - +0.8
1,543,943 - +1.2
1,543,961 - +0.6
1,543,964 - +1.2

Or see this region's nucleotide sequence