Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1339 and Dsui_1340 are separated by 101 nucleotides Dsui_1340 and Dsui_1341 are separated by 24 nucleotides Dsui_1341 and Dsui_1342 are separated by 44 nucleotides Dsui_1342 and Dsui_1343 are separated by 6 nucleotides
Dsui_1339: Dsui_1339 - 23S ribosomal RNA, at 1,395,608 to 1,398,489
_1339
Dsui_1340: Dsui_1340 - 5S ribosomal RNA, at 1,398,591 to 1,398,704
_1340
Dsui_1341: Dsui_1341 - methionine-S-sulfoxide reductase, at 1,398,729 to 1,399,430
_1341
Dsui_1342: Dsui_1342 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 1,399,475 to 1,399,819
_1342
Dsui_1343: Dsui_1343 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 1,399,826 to 1,400,659
_1343
Position (kb)
1398
1399
1400 Strain fitness (log2 ratio)
-1
0
1
2 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.805 kb on + strand, within Dsui_1341 at 1398.818 kb on + strand, within Dsui_1341 at 1398.849 kb on + strand, within Dsui_1341 at 1398.870 kb on - strand, within Dsui_1341 at 1398.885 kb on + strand, within Dsui_1341 at 1398.903 kb on - strand, within Dsui_1341 at 1398.918 kb on - strand, within Dsui_1341 at 1398.960 kb on + strand, within Dsui_1341 at 1399.000 kb on - strand, within Dsui_1341 at 1399.010 kb on - strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.055 kb on + strand, within Dsui_1341 at 1399.063 kb on - strand, within Dsui_1341 at 1399.069 kb on - strand, within Dsui_1341 at 1399.129 kb on + strand, within Dsui_1341 at 1399.129 kb on + strand, within Dsui_1341 at 1399.136 kb on + strand, within Dsui_1341 at 1399.136 kb on + strand, within Dsui_1341 at 1399.137 kb on - strand, within Dsui_1341 at 1399.144 kb on - strand, within Dsui_1341 at 1399.158 kb on + strand, within Dsui_1341 at 1399.166 kb on - strand, within Dsui_1341 at 1399.181 kb on - strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.188 kb on + strand, within Dsui_1341 at 1399.227 kb on + strand, within Dsui_1341 at 1399.240 kb on - strand, within Dsui_1341 at 1399.244 kb on + strand, within Dsui_1341 at 1399.301 kb on + strand, within Dsui_1341 at 1399.307 kb on + strand, within Dsui_1341 at 1399.347 kb on + strand, within Dsui_1341 at 1399.354 kb on + strand, within Dsui_1341 at 1399.365 kb on - strand at 1399.390 kb on + strand at 1399.415 kb on + strand at 1399.477 kb on - strand at 1399.482 kb on - strand at 1399.487 kb on - strand at 1399.499 kb on + strand at 1399.502 kb on - strand at 1399.507 kb on - strand at 1399.514 kb on + strand, within Dsui_1342 at 1399.563 kb on - strand, within Dsui_1342 at 1399.582 kb on + strand, within Dsui_1342 at 1399.680 kb on - strand, within Dsui_1342 at 1399.738 kb on - strand, within Dsui_1342 at 1399.743 kb on - strand, within Dsui_1342 at 1399.761 kb on + strand, within Dsui_1342 at 1399.761 kb on + strand, within Dsui_1342 at 1399.761 kb on + strand, within Dsui_1342 at 1399.769 kb on - strand, within Dsui_1342 at 1399.776 kb on + strand, within Dsui_1342 at 1399.789 kb on - strand at 1399.831 kb on - strand at 1399.879 kb on + strand at 1399.887 kb on - strand at 1399.887 kb on - strand at 1399.919 kb on + strand, within Dsui_1343 at 1399.919 kb on + strand, within Dsui_1343 at 1399.920 kb on + strand, within Dsui_1343 at 1399.924 kb on + strand, within Dsui_1343 at 1399.926 kb on + strand, within Dsui_1343 at 1399.927 kb on - strand, within Dsui_1343 at 1399.927 kb on - strand, within Dsui_1343 at 1399.932 kb on - strand, within Dsui_1343 at 1399.953 kb on + strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.961 kb on - strand, within Dsui_1343 at 1399.963 kb on + strand, within Dsui_1343 at 1399.971 kb on - strand, within Dsui_1343 at 1400.006 kb on - strand, within Dsui_1343 at 1400.014 kb on + strand, within Dsui_1343 at 1400.070 kb on + strand, within Dsui_1343 at 1400.109 kb on + strand, within Dsui_1343 at 1400.111 kb on - strand, within Dsui_1343 at 1400.111 kb on - strand, within Dsui_1343 at 1400.116 kb on + strand, within Dsui_1343 at 1400.117 kb on - strand, within Dsui_1343 at 1400.169 kb on + strand, within Dsui_1343 at 1400.203 kb on - strand, within Dsui_1343 at 1400.239 kb on - strand, within Dsui_1343 at 1400.282 kb on - strand, within Dsui_1343 at 1400.290 kb on - strand, within Dsui_1343 at 1400.292 kb on - strand, within Dsui_1343 at 1400.367 kb on + strand, within Dsui_1343 at 1400.375 kb on - strand, within Dsui_1343 at 1400.375 kb on - strand, within Dsui_1343 at 1400.386 kb on - strand, within Dsui_1343 at 1400.395 kb on + strand, within Dsui_1343 at 1400.403 kb on + strand, within Dsui_1343 at 1400.403 kb on - strand, within Dsui_1343
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 1,398,805 + Dsui_1341 0.11 +0.7 1,398,805 + Dsui_1341 0.11 +0.8 1,398,805 + Dsui_1341 0.11 +1.0 1,398,805 + Dsui_1341 0.11 +1.5 1,398,818 + Dsui_1341 0.13 +0.6 1,398,849 + Dsui_1341 0.17 -0.7 1,398,870 - Dsui_1341 0.20 +0.9 1,398,885 + Dsui_1341 0.22 +1.6 1,398,903 - Dsui_1341 0.25 +1.2 1,398,918 - Dsui_1341 0.27 +0.7 1,398,960 + Dsui_1341 0.33 +0.8 1,399,000 - Dsui_1341 0.39 +0.8 1,399,010 - Dsui_1341 0.40 +0.2 1,399,055 + Dsui_1341 0.46 -0.1 1,399,055 + Dsui_1341 0.46 +0.6 1,399,055 + Dsui_1341 0.46 +1.3 1,399,063 - Dsui_1341 0.48 +0.9 1,399,069 - Dsui_1341 0.48 -0.5 1,399,129 + Dsui_1341 0.57 +0.8 1,399,129 + Dsui_1341 0.57 +1.1 1,399,136 + Dsui_1341 0.58 +0.5 1,399,136 + Dsui_1341 0.58 +1.0 1,399,137 - Dsui_1341 0.58 +0.1 1,399,144 - Dsui_1341 0.59 +0.9 1,399,158 + Dsui_1341 0.61 +0.6 1,399,166 - Dsui_1341 0.62 +0.6 1,399,181 - Dsui_1341 0.64 +0.7 1,399,188 + Dsui_1341 0.65 +1.3 1,399,188 + Dsui_1341 0.65 +0.8 1,399,188 + Dsui_1341 0.65 +0.6 1,399,227 + Dsui_1341 0.71 -0.4 1,399,240 - Dsui_1341 0.73 +1.4 1,399,244 + Dsui_1341 0.73 +1.5 1,399,301 + Dsui_1341 0.81 +0.8 1,399,307 + Dsui_1341 0.82 +0.3 1,399,347 + Dsui_1341 0.88 +0.7 1,399,354 + Dsui_1341 0.89 +0.7 1,399,365 - -0.1 1,399,390 + +1.1 1,399,415 + +0.8 1,399,477 - +0.8 1,399,482 - +0.7 1,399,487 - -0.2 1,399,499 + +0.7 1,399,502 - +0.0 1,399,507 - -0.2 1,399,514 + Dsui_1342 0.11 +1.9 1,399,563 - Dsui_1342 0.26 +1.1 1,399,582 + Dsui_1342 0.31 +1.0 1,399,680 - Dsui_1342 0.59 +0.6 1,399,738 - Dsui_1342 0.76 +1.2 1,399,743 - Dsui_1342 0.78 -0.6 1,399,761 + Dsui_1342 0.83 +0.7 1,399,761 + Dsui_1342 0.83 +2.0 1,399,761 + Dsui_1342 0.83 +0.5 1,399,769 - Dsui_1342 0.85 +0.8 1,399,776 + Dsui_1342 0.87 +0.0 1,399,789 - +1.1 1,399,831 - +1.1 1,399,879 + +1.1 1,399,887 - +1.1 1,399,887 - -0.2 1,399,919 + Dsui_1343 0.11 +1.9 1,399,919 + Dsui_1343 0.11 +0.8 1,399,920 + Dsui_1343 0.11 +1.1 1,399,924 + Dsui_1343 0.12 +1.1 1,399,926 + Dsui_1343 0.12 +0.6 1,399,927 - Dsui_1343 0.12 +0.3 1,399,927 - Dsui_1343 0.12 +0.0 1,399,932 - Dsui_1343 0.13 +0.8 1,399,953 + Dsui_1343 0.15 +0.4 1,399,961 - Dsui_1343 0.16 +1.0 1,399,961 - Dsui_1343 0.16 -0.2 1,399,961 - Dsui_1343 0.16 +0.7 1,399,963 + Dsui_1343 0.16 +1.1 1,399,971 - Dsui_1343 0.17 +0.2 1,400,006 - Dsui_1343 0.22 +0.8 1,400,014 + Dsui_1343 0.23 +0.8 1,400,070 + Dsui_1343 0.29 +0.9 1,400,109 + Dsui_1343 0.34 +0.8 1,400,111 - Dsui_1343 0.34 +1.0 1,400,111 - Dsui_1343 0.34 +1.5 1,400,116 + Dsui_1343 0.35 +0.5 1,400,117 - Dsui_1343 0.35 +0.8 1,400,169 + Dsui_1343 0.41 +0.5 1,400,203 - Dsui_1343 0.45 -0.1 1,400,239 - Dsui_1343 0.50 +0.6 1,400,282 - Dsui_1343 0.55 +0.5 1,400,290 - Dsui_1343 0.56 +0.5 1,400,292 - Dsui_1343 0.56 +0.7 1,400,367 + Dsui_1343 0.65 -0.0 1,400,375 - Dsui_1343 0.66 +2.0 1,400,375 - Dsui_1343 0.66 +0.5 1,400,386 - Dsui_1343 0.67 +0.6 1,400,395 + Dsui_1343 0.68 +0.3 1,400,403 + Dsui_1343 0.69 -0.2 1,400,403 - Dsui_1343 0.69 -0.5
Or see this region's nucleotide sequence