Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0847 and Dsui_0848 are separated by 4 nucleotides Dsui_0848 and Dsui_0849 overlap by 4 nucleotides Dsui_0849 and Dsui_0850 are separated by 274 nucleotides Dsui_0850 and Dsui_0851 are separated by 73 nucleotides
Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780
_0847
Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567
_0848
Dsui_0849: Dsui_0849 - ParB-like partition protein, at 866,564 to 867,397
_0849
Dsui_0850: Dsui_0850 - hypothetical protein, at 867,672 to 867,947
_0850
Dsui_0851: Dsui_0851 - F0F1-type ATP synthase, alpha subunit, at 868,021 to 868,896
_0851
Position (kb) 866
867
868 Strain fitness (log2 ratio) -1
0
1
2 at 865.565 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.775 kb on + strand at 865.790 kb on + strand at 867.531 kb on + strand at 867.539 kb on - strand at 867.548 kb on + strand at 867.641 kb on + strand at 867.644 kb on + strand at 867.716 kb on + strand, within Dsui_0850 at 867.721 kb on + strand, within Dsui_0850 at 867.721 kb on + strand, within Dsui_0850 at 867.726 kb on + strand, within Dsui_0850 at 867.773 kb on + strand, within Dsui_0850 at 867.776 kb on + strand, within Dsui_0850 at 867.884 kb on + strand, within Dsui_0850 at 867.929 kb on + strand at 867.929 kb on + strand at 867.929 kb on + strand at 867.929 kb on + strand at 867.952 kb on + strand at 867.967 kb on + strand at 867.967 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 865,565 + Dsui_0847 0.66 -1.4 865,608 + Dsui_0847 0.73 +0.8 865,608 + Dsui_0847 0.73 +0.5 865,712 + Dsui_0847 0.89 -0.4 865,712 + Dsui_0847 0.89 -1.5 865,775 + -1.6 865,790 + +0.5 867,531 + +0.5 867,539 - +0.2 867,548 + +0.9 867,641 + +1.4 867,644 + +1.0 867,716 + Dsui_0850 0.16 +2.7 867,721 + Dsui_0850 0.18 +0.5 867,721 + Dsui_0850 0.18 +0.7 867,726 + Dsui_0850 0.20 +0.3 867,773 + Dsui_0850 0.37 +0.8 867,776 + Dsui_0850 0.38 +2.1 867,884 + Dsui_0850 0.77 +2.0 867,929 + +1.3 867,929 + +1.1 867,929 + +1.1 867,929 + +0.6 867,952 + +1.3 867,967 + +0.4 867,967 + +0.8
Or see this region's nucleotide sequence