Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0494 and Dsui_0495 are separated by 9 nucleotides Dsui_0495 and Dsui_0496 overlap by 4 nucleotides Dsui_0496 and Dsui_0497 are separated by 137 nucleotides
Dsui_0494: Dsui_0494 - ribonuclease PH, at 496,759 to 497,475
_0494
Dsui_0495: Dsui_0495 - serine/threonine protein phosphatase, at 497,485 to 498,396
_0495
Dsui_0496: Dsui_0496 - serine/threonine protein kinase, at 498,393 to 499,358
_0496
Dsui_0497: Dsui_0497 - TIGR00255 family protein, at 499,496 to 500,362
_0497
Position (kb) 498
499
500 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 497.567 kb on + strand at 497.662 kb on - strand, within Dsui_0495 at 497.662 kb on - strand, within Dsui_0495 at 497.759 kb on - strand, within Dsui_0495 at 497.773 kb on - strand, within Dsui_0495 at 497.819 kb on - strand, within Dsui_0495 at 497.837 kb on + strand, within Dsui_0495 at 497.910 kb on - strand, within Dsui_0495 at 497.910 kb on - strand, within Dsui_0495 at 497.911 kb on - strand, within Dsui_0495 at 498.033 kb on - strand, within Dsui_0495 at 498.126 kb on + strand, within Dsui_0495 at 498.134 kb on - strand, within Dsui_0495 at 498.141 kb on + strand, within Dsui_0495 at 498.144 kb on - strand, within Dsui_0495 at 498.161 kb on + strand, within Dsui_0495 at 498.168 kb on - strand, within Dsui_0495 at 498.168 kb on - strand, within Dsui_0495 at 498.417 kb on - strand at 498.766 kb on + strand, within Dsui_0496 at 498.779 kb on - strand, within Dsui_0496 at 498.786 kb on - strand, within Dsui_0496 at 499.036 kb on + strand, within Dsui_0496 at 499.108 kb on - strand, within Dsui_0496 at 499.189 kb on - strand, within Dsui_0496 at 499.204 kb on - strand, within Dsui_0496 at 499.222 kb on - strand, within Dsui_0496 at 499.338 kb on - strand at 499.401 kb on + strand at 499.514 kb on - strand at 499.557 kb on + strand at 499.562 kb on + strand at 499.572 kb on + strand at 499.789 kb on - strand, within Dsui_0497 at 499.800 kb on - strand, within Dsui_0497 at 499.823 kb on + strand, within Dsui_0497 at 499.824 kb on - strand, within Dsui_0497 at 499.896 kb on + strand, within Dsui_0497 at 499.904 kb on - strand, within Dsui_0497 at 500.026 kb on + strand, within Dsui_0497 at 500.049 kb on + strand, within Dsui_0497 at 500.077 kb on + strand, within Dsui_0497 at 500.147 kb on + strand, within Dsui_0497 at 500.164 kb on + strand, within Dsui_0497 at 500.287 kb on - strand at 500.293 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate remove 497,567 + -0.3 497,662 - Dsui_0495 0.19 +1.4 497,662 - Dsui_0495 0.19 +0.9 497,759 - Dsui_0495 0.30 +1.2 497,773 - Dsui_0495 0.32 +0.8 497,819 - Dsui_0495 0.37 +0.8 497,837 + Dsui_0495 0.39 +0.9 497,910 - Dsui_0495 0.47 +1.9 497,910 - Dsui_0495 0.47 -0.2 497,911 - Dsui_0495 0.47 +0.8 498,033 - Dsui_0495 0.60 +0.4 498,126 + Dsui_0495 0.70 -1.5 498,134 - Dsui_0495 0.71 +1.5 498,141 + Dsui_0495 0.72 +1.0 498,144 - Dsui_0495 0.72 +1.1 498,161 + Dsui_0495 0.74 +2.9 498,168 - Dsui_0495 0.75 +1.6 498,168 - Dsui_0495 0.75 +1.1 498,417 - +0.7 498,766 + Dsui_0496 0.39 +0.7 498,779 - Dsui_0496 0.40 +0.1 498,786 - Dsui_0496 0.41 +0.8 499,036 + Dsui_0496 0.67 -0.0 499,108 - Dsui_0496 0.74 -0.9 499,189 - Dsui_0496 0.82 +0.4 499,204 - Dsui_0496 0.84 +1.1 499,222 - Dsui_0496 0.86 +0.7 499,338 - -1.1 499,401 + +0.7 499,514 - -1.7 499,557 + -1.5 499,562 + -1.0 499,572 + -0.6 499,789 - Dsui_0497 0.34 +0.6 499,800 - Dsui_0497 0.35 -1.7 499,823 + Dsui_0497 0.38 -0.8 499,824 - Dsui_0497 0.38 +0.1 499,896 + Dsui_0497 0.46 -3.4 499,904 - Dsui_0497 0.47 -0.2 500,026 + Dsui_0497 0.61 -2.2 500,049 + Dsui_0497 0.64 +0.5 500,077 + Dsui_0497 0.67 +0.4 500,147 + Dsui_0497 0.75 -1.7 500,164 + Dsui_0497 0.77 +0.6 500,287 - -0.5 500,293 + +0.3
Or see this region's nucleotide sequence