Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22875

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
5,013,445	+		AO353_22865	0.80	+0.1
5,013,446	-		AO353_22865	0.80	+1.1
5,013,645	-				+1.9
5,013,788	+				+1.1
5,013,788	+				-0.5
5,013,788	+				+0.5
5,013,788	+				+1.5
5,013,788	+				-0.9
5,013,789	-				+1.0
5,013,789	-				+1.2
5,013,821	+				+1.5
5,013,822	-				-1.9
5,013,822	-				-0.3
5,014,003	+		AO353_22870	0.44	+0.4
5,014,050	+		AO353_22870	0.54	-0.1
5,014,050	+		AO353_22870	0.54	+2.3
5,014,062	+		AO353_22870	0.56	-0.5
5,014,062	+		AO353_22870	0.56	+0.1
5,014,062	+		AO353_22870	0.56	+1.1
5,014,062	+		AO353_22870	0.56	+0.1
5,014,063	-		AO353_22870	0.57	+0.7
5,014,230	+				-2.2
5,014,231	-				+0.5
5,014,282	+				+1.0
5,014,282	+				+0.7
5,014,282	+				-0.6
5,014,283	-				+0.7
5,014,283	-				+1.9
5,014,343	+				+0.5
5,014,343	+				-0.3
5,014,344	-				+0.2
5,014,346	+				-0.3
5,014,347	-				+0.7
5,014,347	-				+0.3
5,014,347	-				+1.7
5,014,356	+				+2.7
5,014,422	+				+1.0
5,014,422	+				+0.7
5,014,422	+				+0.2
5,014,573	-		AO353_22875	0.15	-1.3
5,014,617	+		AO353_22875	0.19	+0.7
5,014,617	+		AO353_22875	0.19	-1.0
5,014,617	+		AO353_22875	0.19	-0.0
5,014,618	-		AO353_22875	0.19	+0.1
5,014,618	-		AO353_22875	0.19	-1.5
5,014,618	-		AO353_22875	0.19	+0.1
5,014,618	-		AO353_22875	0.19	-1.6
5,014,618	-		AO353_22875	0.19	+0.7
5,014,618	-		AO353_22875	0.19	+1.9
5,014,680	+				-0.9
5,014,680	+		AO353_22875	0.23	-0.7
5,014,680	+		AO353_22875	0.23	-0.3
5,014,680	+		AO353_22875	0.23	+0.7
5,014,680	+		AO353_22875	0.23	+0.9
5,014,680	+		AO353_22875	0.23	+0.4
5,014,681	-		AO353_22875	0.23	-0.9
5,014,681	-		AO353_22875	0.23	-0.9
5,014,681	-		AO353_22875	0.23	-1.6
5,014,681	-		AO353_22875	0.23	+0.2
5,014,729	-		AO353_22875	0.27	+0.3
5,014,729	-		AO353_22875	0.27	-1.3
5,014,800	+		AO353_22875	0.32	+2.5
5,014,800	+		AO353_22875	0.32	+0.7
5,014,800	+		AO353_22875	0.32	+1.0
5,014,800	+		AO353_22875	0.32	-0.3
5,014,800	+		AO353_22875	0.32	+0.1
5,014,800	+		AO353_22875	0.32	+0.0
5,014,800	+		AO353_22875	0.32	+0.3
5,014,801	-		AO353_22875	0.32	+1.2
5,014,801	-		AO353_22875	0.32	+1.7
5,014,801	-		AO353_22875	0.32	-0.9
5,014,801	-		AO353_22875	0.32	+0.3
5,014,801	-		AO353_22875	0.32	-1.6
5,014,801	-		AO353_22875	0.32	-0.9
5,014,801	-		AO353_22875	0.32	+0.5
5,014,801	-		AO353_22875	0.32	-0.1
5,014,801	-		AO353_22875	0.32	-0.6
5,014,887	+		AO353_22875	0.38	-0.4
5,014,887	+		AO353_22875	0.38	-2.3
5,014,951	+		AO353_22875	0.42	-0.2
5,014,952	-		AO353_22875	0.42	-0.9
5,014,952	-		AO353_22875	0.42	+0.2
5,015,146	-		AO353_22875	0.56	-0.7
5,015,146	-		AO353_22875	0.56	-0.6
5,015,170	-		AO353_22875	0.58	+0.7
5,015,170	-		AO353_22875	0.58	+0.7
5,015,246	-		AO353_22875	0.63	-0.5
5,015,257	+		AO353_22875	0.64	+0.1
5,015,258	-		AO353_22875	0.64	-0.6
5,015,261	+		AO353_22875	0.64	+0.9
5,015,261	+		AO353_22875	0.64	-1.1
5,015,262	-		AO353_22875	0.64	-0.0
5,015,359	-		AO353_22875	0.71	-0.0
5,015,376	+		AO353_22875	0.73	-2.5
5,015,376	+		AO353_22875	0.73	+1.5
5,015,376	+		AO353_22875	0.73	-1.3
5,015,376	+		AO353_22875	0.73	-0.1
5,015,377	-		AO353_22875	0.73	-0.3
5,015,377	-		AO353_22875	0.73	-2.0
5,015,400	+		AO353_22875	0.74	-0.7
5,015,401	-		AO353_22875	0.74	-0.1
5,015,403	+		AO353_22875	0.74	-1.1
5,015,404	-		AO353_22875	0.75	-1.2
5,015,404	-		AO353_22875	0.75	+0.7
5,015,545	+		AO353_22875	0.85	-2.1
5,015,545	+		AO353_22875	0.85	-0.0
5,015,546	-		AO353_22875	0.85	-1.0
5,015,598	+		AO353_22875	0.88	-0.3
5,015,599	-		AO353_22875	0.88	-2.5
5,015,610	+		AO353_22875	0.89	+0.7
5,015,610	+		AO353_22875	0.89	-0.3
5,015,611	-		AO353_22875	0.89	-1.3
5,015,611	-		AO353_22875	0.89	-1.3
5,015,611	-		AO353_22875	0.89	-1.1
5,015,611	-		AO353_22875	0.89	-2.1
5,015,611	-		AO353_22875	0.89	-0.9
5,015,611	-		AO353_22875	0.89	-0.6
5,015,611	-		AO353_22875	0.89	+1.0
5,015,640	+				+0.6
5,015,641	-				-0.8
5,015,641	-				-0.5
5,015,711	+				+0.7
5,015,772	+				+0.2
5,015,772	+				+2.3
5,015,773	-				-1.9
5,015,773	-				+0.7
5,015,810	-				-0.3
5,015,900	+				-0.2
5,015,900	+				+2.1
5,015,900	+				+2.3
5,015,901	-				-1.3
5,015,901	-				-0.5
5,015,904	+				-0.3
5,015,905	-				+0.9
5,015,905	-				-0.9
5,015,905	-				+0.4
5,015,905	-				+0.1
5,015,905	-				+0.4
5,015,905	-				+0.7
5,015,905	-				+1.4
5,015,905	-				-1.0
5,015,934	-				-1.1
5,015,934	-				+3.3
5,015,934	-				-0.2
5,015,936	+				-0.6
5,015,942	+				+0.7
5,015,943	-				-0.5
5,015,972	+				+0.2
5,015,973	-				-0.3
5,015,973	-				+0.4
5,015,975	+				+1.9
5,015,976	-				+0.7
5,015,981	-				+0.3
5,015,981	-				+0.7
5,015,994	+				-0.6
5,015,994	+				+1.1
5,015,994	+				+0.1
5,016,149	-		AO353_22880	0.26	-0.2
5,016,224	+		AO353_22880	0.43	-0.0
5,016,224	+		AO353_22880	0.43	-1.3
5,016,225	-		AO353_22880	0.43	+1.6
5,016,225	-		AO353_22880	0.43	+0.3
5,016,354	+		AO353_22880	0.72	+0.2
5,016,354	+		AO353_22880	0.72	-0.3
5,016,354	+		AO353_22880	0.72	-0.3
5,016,355	-		AO353_22880	0.73	-0.3
5,016,355	-		AO353_22880	0.73	-0.6
5,016,355	-		AO353_22880	0.73	+1.4
5,016,355	-		AO353_22880	0.73	+1.1
5,016,372	+		AO353_22880	0.76	+1.8
5,016,372	+		AO353_22880	0.76	+0.2
5,016,372	+		AO353_22880	0.76	-0.5
5,016,373	-		AO353_22880	0.77	-1.2
5,016,373	-		AO353_22880	0.77	-1.0
5,016,373	-		AO353_22880	0.77	-0.9
5,016,373	-		AO353_22880	0.77	+0.1
5,016,373	-		AO353_22880	0.77	+0.7
5,016,373	-		AO353_22880	0.77	-1.3
5,016,420	+		AO353_22880	0.87	-1.3
5,016,420	+		AO353_22880	0.87	+0.7
5,016,420	+		AO353_22880	0.87	-1.6
5,016,421	-		AO353_22880	0.87	-0.9
5,016,421	-		AO353_22880	0.87	+1.1
5,016,456	-				-1.3
5,016,456	-				-0.3
5,016,456	-				-0.3
5,016,573	+				-1.5
5,016,573	+				-0.0
5,016,573	+				-0.3
5,016,573	+				+3.0
5,016,573	+				+0.4
5,016,594	-				-0.4
5,016,594	-				+0.1
5,016,636	+				-2.1
5,016,660	+				-0.3