Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19900

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
4,373,500	+		AO353_19895	0.19	+0.9
4,373,500	+		AO353_19895	0.19	+1.0
4,373,501	-		AO353_19895	0.19	-0.1
4,373,501	-		AO353_19895	0.19	+0.4
4,373,501	-		AO353_19895	0.19	+0.6
4,373,514	+		AO353_19895	0.21	+1.4
4,373,515	-		AO353_19895	0.21	+0.5
4,373,594	+		AO353_19895	0.33	-1.5
4,373,669	+		AO353_19895	0.45	+0.5
4,373,669	+		AO353_19895	0.45	+0.2
4,373,713	+		AO353_19895	0.52	+1.1
4,373,714	-		AO353_19895	0.52	+1.1
4,373,714	-		AO353_19895	0.52	-1.0
4,373,714	-		AO353_19895	0.52	-1.1
4,373,714	-		AO353_19895	0.52	-2.1
4,373,714	-		AO353_19895	0.52	+0.9
4,373,714	-				+1.9
4,373,714	-		AO353_19895	0.52	-1.9
4,373,714	-		AO353_19895	0.52	+0.3
4,373,735	-		AO353_19895	0.55	+1.6
4,373,827	+		AO353_19895	0.69	-0.5
4,373,827	+		AO353_19895	0.69	-1.5
4,373,827	+		AO353_19895	0.69	-0.7
4,373,828	-		AO353_19895	0.70	-1.1
4,373,828	-		AO353_19895	0.70	-2.5
4,373,848	+		AO353_19895	0.73	-0.2
4,373,849	-		AO353_19895	0.73	-0.1
4,373,897	+		AO353_19895	0.80	-1.9
4,373,897	+		AO353_19895	0.80	+1.3
4,373,897	+		AO353_19895	0.80	-0.9
4,373,897	+		AO353_19895	0.80	+2.3
4,373,897	+		AO353_19895	0.80	-0.3
4,373,897	+		AO353_19895	0.80	-0.9
4,373,898	-		AO353_19895	0.80	-0.6
4,373,898	-		AO353_19895	0.80	+0.7
4,373,898	-		AO353_19895	0.80	-0.2
4,373,898	-		AO353_19895	0.80	-1.5
4,373,898	-		AO353_19895	0.80	+0.7
4,374,086	+				+1.4
4,374,094	+				+0.2
4,374,115	+				+1.0
4,374,184	+				+0.1
4,374,215	+				+0.3
4,374,347	-				-1.3
4,374,451	-		AO353_19900	0.14	-0.5
4,374,451	-		AO353_19900	0.14	+0.8
4,374,516	+		AO353_19900	0.21	+0.3
4,374,517	-		AO353_19900	0.21	-0.7
4,374,541	+		AO353_19900	0.23	+0.6
4,374,542	-		AO353_19900	0.24	+1.4
4,374,583	+		AO353_19900	0.28	-1.7
4,374,583	+		AO353_19900	0.28	+1.3
4,374,583	+		AO353_19900	0.28	-1.7
4,374,583	+		AO353_19900	0.28	-2.7
4,374,583	+		AO353_19900	0.28	+2.4
4,374,584	-		AO353_19900	0.28	-0.4
4,374,584	-		AO353_19900	0.28	-0.1
4,374,584	-		AO353_19900	0.28	+0.9
4,374,584	-		AO353_19900	0.28	+0.1
4,374,633	+		AO353_19900	0.34	-1.5
4,374,633	+		AO353_19900	0.34	-0.6
4,374,633	+		AO353_19900	0.34	+0.2
4,374,633	+		AO353_19900	0.34	+0.1
4,374,634	-		AO353_19900	0.34	+0.9
4,374,634	-		AO353_19900	0.34	+0.1
4,374,637	+		AO353_19900	0.34	+1.1
4,374,637	+		AO353_19900	0.34	-0.6
4,374,637	+		AO353_19900	0.34	+0.3
4,374,638	-		AO353_19900	0.34	-0.1
4,374,638	-		AO353_19900	0.34	+0.7
4,374,638	-		AO353_19900	0.34	-0.4
4,374,638	-		AO353_19900	0.34	-0.7
4,374,673	+		AO353_19900	0.38	+1.6
4,374,673	+		AO353_19900	0.38	+0.9
4,374,673	+		AO353_19900	0.38	-0.1
4,374,673	+		AO353_19900	0.38	+1.4
4,374,673	+		AO353_19900	0.38	-0.6
4,374,673	+		AO353_19900	0.38	+2.2
4,374,673	+		AO353_19900	0.38	+0.5
4,374,673	+		AO353_19900	0.38	+0.1
4,374,673	+		AO353_19900	0.38	+1.3
4,374,674	-		AO353_19900	0.38	+0.1
4,374,674	-				-2.3
4,374,674	-		AO353_19900	0.38	+0.4
4,374,674	-		AO353_19900	0.38	-1.1
4,374,674	-		AO353_19900	0.38	+0.3
4,374,674	-		AO353_19900	0.38	-1.5
4,374,674	-		AO353_19900	0.38	-0.1
4,374,674	-		AO353_19900	0.38	-1.5
4,374,674	-		AO353_19900	0.38	-0.7
4,374,674	-		AO353_19900	0.38	+0.0
4,374,674	-		AO353_19900	0.38	+1.4
4,374,682	+		AO353_19900	0.39	+0.1
4,374,682	+		AO353_19900	0.39	+0.2
4,374,682	+		AO353_19900	0.39	-0.1
4,374,682	+		AO353_19900	0.39	+0.3
4,374,683	-		AO353_19900	0.39	+1.1
4,374,683	-		AO353_19900	0.39	-0.7
4,374,705	+		AO353_19900	0.41	+0.3
4,374,705	+		AO353_19900	0.41	-0.1
4,374,705	+		AO353_19900	0.41	+0.6
4,374,705	+		AO353_19900	0.41	+0.3
4,374,706	-		AO353_19900	0.42	-1.1
4,374,706	-		AO353_19900	0.42	-1.5
4,374,706	-		AO353_19900	0.42	+3.0
4,374,706	-		AO353_19900	0.42	-0.6
4,374,727	+		AO353_19900	0.44	-1.1
4,374,727	+		AO353_19900	0.44	+0.7
4,374,728	-		AO353_19900	0.44	+0.5
4,374,793	+		AO353_19900	0.51	-0.9
4,374,794	-		AO353_19900	0.51	+0.6
4,374,898	+		AO353_19900	0.63	+1.7
4,374,898	+		AO353_19900	0.63	+0.1
4,374,898	+		AO353_19900	0.63	-0.9
4,374,957	+		AO353_19900	0.69	+0.9
4,374,957	+		AO353_19900	0.69	-0.6
4,374,957	+		AO353_19900	0.69	+0.0
4,374,958	-		AO353_19900	0.69	-0.5
4,374,958	-		AO353_19900	0.69	+1.1
4,374,958	-		AO353_19900	0.69	+0.1
4,374,958	-		AO353_19900	0.69	-0.7
4,375,019	+		AO353_19900	0.76	+0.1
4,375,036	-		AO353_19900	0.78	+1.5
4,375,036	-		AO353_19900	0.78	-0.1
4,375,036	-		AO353_19900	0.78	-0.4
4,375,036	-		AO353_19900	0.78	+1.2
4,375,036	-		AO353_19900	0.78	-0.3
4,375,162	+				-0.7
4,375,162	+				-0.7
4,375,163	-				+1.4
4,375,163	-				-0.0
4,375,163	-				+0.3
4,375,163	-				-0.4
4,375,163	-				+0.6
4,375,175	+				+3.7
4,375,244	+				-2.5
4,375,244	+				+0.3
4,375,244	+				-0.3
4,375,395	+		AO353_19905	0.11	+0.6
4,375,395	+		AO353_19905	0.11	+0.3
4,375,395	+		AO353_19905	0.11	+1.0
4,375,395	+		AO353_19905	0.11	+0.9
4,375,396	-		AO353_19905	0.12	+2.2
4,375,396	-		AO353_19905	0.12	+1.4
4,375,587	+		AO353_19905	0.38	-0.4
4,375,587	+		AO353_19905	0.38	+1.9
4,375,587	+		AO353_19905	0.38	-0.0
4,375,587	+		AO353_19905	0.38	+0.7
4,375,588	-		AO353_19905	0.38	+1.1
4,375,597	+		AO353_19905	0.39	+1.1
4,375,597	+		AO353_19905	0.39	+0.5
4,375,598	-		AO353_19905	0.40	-2.9
4,375,598	-		AO353_19905	0.40	-1.3
4,375,622	+		AO353_19905	0.43	+0.7
4,375,623	-		AO353_19905	0.43	-1.5
4,375,623	-		AO353_19905	0.43	+0.4
4,375,623	-		AO353_19905	0.43	+1.0
4,375,833	+		AO353_19905	0.72	+0.9
4,375,833	+		AO353_19905	0.72	+0.4
4,375,833	+		AO353_19905	0.72	-1.0
4,375,834	-		AO353_19905	0.72	+0.9
4,375,834	-		AO353_19905	0.72	+0.4
4,375,834	-		AO353_19905	0.72	-0.9
4,375,834	-		AO353_19905	0.72	+1.3
4,375,909	+		AO353_19905	0.83	+3.7
4,375,967	+				-0.5
4,375,967	+				+0.9
4,375,967	+				+1.9
4,375,968	-				+0.2
4,376,069	+				-1.1
4,376,069	+				-1.7
4,376,070	-				-2.8
4,376,070	-				-1.5
4,376,070	-				-0.5
4,376,070	-				+0.7
4,376,093	-				-0.8
4,376,152	+		AO353_19910	0.14	+1.2
4,376,152	+		AO353_19910	0.14	-1.1
4,376,152	+		AO353_19910	0.14	+1.0
4,376,152	+		AO353_19910	0.14	-2.1
4,376,152	+		AO353_19910	0.14	+1.2
4,376,152	+		AO353_19910	0.14	-1.7
4,376,152	+		AO353_19910	0.14	-0.3
4,376,152	+		AO353_19910	0.14	-0.3
4,376,152	+		AO353_19910	0.14	+4.0
4,376,152	+		AO353_19910	0.14	+0.5
4,376,152	+		AO353_19910	0.14	-0.1
4,376,152	+		AO353_19910	0.14	-0.4
4,376,152	+		AO353_19910	0.14	-1.5
4,376,152	+		AO353_19910	0.14	-0.7
4,376,152	+		AO353_19910	0.14	+1.4
4,376,152	+		AO353_19910	0.14	+0.3
4,376,153	-		AO353_19910	0.14	-1.7
4,376,153	-		AO353_19910	0.14	+0.4
4,376,153	-		AO353_19910	0.14	+0.4
4,376,153	-		AO353_19910	0.14	+0.9
4,376,153	-		AO353_19910	0.14	+2.0
4,376,153	-		AO353_19910	0.14	-1.7
4,376,153	-		AO353_19910	0.14	+0.1
4,376,167	+		AO353_19910	0.16	+0.6
4,376,168	-		AO353_19910	0.16	+2.7