Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15640

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
3,459,745	+				-1.4
3,459,778	+		AO353_15635	0.12	-0.5
3,459,778	+		AO353_15635	0.12	+0.4
3,459,778	+		AO353_15635	0.12	-0.5
3,459,779	-		AO353_15635	0.12	-0.5
3,459,893	+		AO353_15635	0.25	-2.2
3,459,893	+		AO353_15635	0.25	-0.5
3,459,893	+		AO353_15635	0.25	+1.2
3,459,893	+		AO353_15635	0.25	-1.5
3,459,893	+		AO353_15635	0.25	-0.1
3,459,893	+		AO353_15635	0.25	-0.3
3,459,893	+		AO353_15635	0.25	-1.8
3,459,893	+		AO353_15635	0.25	-0.8
3,459,893	+		AO353_15635	0.25	-1.2
3,459,893	+		AO353_15635	0.25	-0.7
3,459,893	+		AO353_15635	0.25	-0.9
3,459,893	+		AO353_15635	0.25	-0.2
3,459,894	-		AO353_15635	0.25	+1.6
3,459,894	-		AO353_15635	0.25	+1.6
3,459,894	-		AO353_15635	0.25	-0.9
3,459,894	-		AO353_15635	0.25	-0.9
3,459,894	-		AO353_15635	0.25	+1.1
3,459,894	-		AO353_15635	0.25	+0.8
3,459,894	-		AO353_15635	0.25	+1.1
3,459,894	-		AO353_15635	0.25	+0.7
3,459,894	-		AO353_15635	0.25	+2.2
3,460,063	+		AO353_15635	0.44	+0.8
3,460,093	+		AO353_15635	0.47	+0.1
3,460,093	+		AO353_15635	0.47	+1.4
3,460,093	+		AO353_15635	0.47	+1.1
3,460,093	+		AO353_15635	0.47	-0.9
3,460,093	+		AO353_15635	0.47	+0.3
3,460,094	-		AO353_15635	0.47	+0.5
3,460,094	-		AO353_15635	0.47	+2.3
3,460,094	-		AO353_15635	0.47	-2.7
3,460,094	-		AO353_15635	0.47	+0.9
3,460,094	-		AO353_15635	0.47	-0.3
3,460,094	-		AO353_15635	0.47	-1.0
3,460,094	-		AO353_15635	0.47	-0.2
3,460,094	-		AO353_15635	0.47	+0.3
3,460,094	-		AO353_15635	0.47	+1.1
3,460,137	-		AO353_15635	0.52	-0.3
3,460,137	-		AO353_15635	0.52	+1.9
3,460,298	+		AO353_15635	0.70	+0.7
3,460,378	+		AO353_15635	0.78	+1.3
3,460,378	+		AO353_15635	0.78	-2.1
3,460,379	-		AO353_15635	0.78	+1.1
3,460,381	+		AO353_15635	0.79	+1.2
3,460,381	+		AO353_15635	0.79	-0.4
3,460,381	+		AO353_15635	0.79	-0.3
3,460,381	+		AO353_15635	0.79	+0.8
3,460,381	+		AO353_15635	0.79	+0.3
3,460,381	+		AO353_15635	0.79	+1.1
3,460,381	+		AO353_15635	0.79	+0.9
3,460,381	+		AO353_15635	0.79	+2.3
3,460,381	+		AO353_15635	0.79	-0.3
3,460,381	+		AO353_15635	0.79	+0.1
3,460,381	+		AO353_15635	0.79	-1.5
3,460,382	-		AO353_15635	0.79	-0.5
3,460,382	-		AO353_15635	0.79	+0.7
3,460,382	-		AO353_15635	0.79	+0.6
3,460,382	-		AO353_15635	0.79	+0.1
3,460,382	-		AO353_15635	0.79	+0.1
3,460,382	-		AO353_15635	0.79	+1.7
3,460,382	-		AO353_15635	0.79	+0.5
3,460,421	+		AO353_15635	0.83	-1.9
3,460,421	+		AO353_15635	0.83	+1.8
3,460,546	+				+0.1
3,460,546	+				+0.2
3,460,547	-				-0.9
3,460,566	+				-0.2
3,460,566	+				+0.8
3,460,567	-				+1.6
3,460,567	-				+0.1
3,460,567	-				+0.2
3,460,567	-				-0.2
3,460,575	+				-0.5
3,460,704	+				-0.3
3,460,704	+				-0.9
3,460,704	+				+1.3
3,460,704	+				+0.1
3,460,704	+				-1.2
3,460,704	+				+0.3
3,460,704	+				+1.1
3,460,704	+				+0.8
3,460,704	+				-0.3
3,460,704	+				-1.2
3,460,704	+				-1.9
3,460,705	-				+0.1
3,460,705	-				+0.3
3,460,705	-				+1.5
3,460,705	-				+1.3
3,460,705	-				+0.3
3,460,705	-				+0.1
3,460,705	-				+0.3
3,460,705	-				+1.1
3,460,705	-				+0.9
3,460,705	-				+0.5
3,460,705	-				+0.4
3,460,705	-				-0.5
3,460,705	-				+0.9
3,460,727	+				+1.3
3,460,728	-				-0.9
3,460,773	+				+0.4
3,460,773	+				+1.5
3,460,774	-				-0.1
3,460,774	-				+0.3
3,460,774	-				-0.4
3,460,884	+		AO353_15640	0.18	-0.2
3,460,884	+		AO353_15640	0.18	+0.1
3,460,885	-		AO353_15640	0.18	-1.0
3,460,885	-		AO353_15640	0.18	+0.5
3,460,885	-		AO353_15640	0.18	-0.9
3,461,007	+		AO353_15640	0.28	-0.2
3,461,007	+		AO353_15640	0.28	+0.9
3,461,903	+				+0.3
3,461,903	+				+0.1
3,461,903	+				+0.1
3,461,903	+				+0.6
3,461,903	+				+0.7
3,461,904	-				-0.9
3,461,904	-				+1.1
3,461,904	-				+0.7
3,461,904	-				+0.7
3,461,904	-				-1.2
3,461,927	+				-1.4
3,461,927	+				-0.7
3,461,927	+				+0.5
3,461,927	+				+1.1
3,461,928	-				-1.5
3,461,928	-				-1.1
3,461,928	-				+0.3
3,461,928	-				+0.1
3,461,928	-				+0.8
3,461,928	-				-0.2
3,461,963	+				+0.2
3,461,963	+				-0.5
3,462,000	+				+1.1
3,462,000	+				+2.1
3,462,000	+				-0.5
3,462,000	+				-0.9
3,462,000	+				+0.1
3,462,000	+				-0.5
3,462,000	+				-0.1
3,462,000	+				+0.1
3,462,000	+				+0.3
3,462,000	+				-0.9
3,462,000	+				+1.1
3,462,000	+				-1.5
3,462,000	+				+1.4
3,462,000	+				+0.6
3,462,001	-				-1.5
3,462,001	-				+0.3
3,462,001	-				-1.1
3,462,001	-				-1.5
3,462,001	-				-1.4
3,462,041	+				+2.4
3,462,041	+				+1.3
3,462,041	+				+0.6
3,462,041	+				-1.4
3,462,041	+				-1.7
3,462,042	-				-0.5
3,462,058	+				-2.5
3,462,058	+				+0.4
3,462,059	-				+0.1
3,462,059	-				+0.5
3,462,062	-				+0.6
3,462,086	+				+0.7
3,462,124	+				-0.4
3,462,125	-				+0.3
3,462,125	-				-0.9
3,462,125	-				+1.7
3,462,140	-				+0.1
3,462,156	+				-0.0
3,462,156	+				-1.5
3,462,157	-				+0.1
3,462,157	-				+1.1
3,462,157	-				-0.2
3,462,169	+				+0.1
3,462,169	+				-0.9
3,462,169	+				+0.6
3,462,169	+				+1.1
3,462,169	+				-0.4
3,462,169	+				+0.1
3,462,169	+				-1.0
3,462,169	+				+0.3
3,462,170	-				-1.4
3,462,170	-				+0.6
3,462,170	-				+1.9
3,462,170	-				+0.6
3,462,391	+		AO353_15645	0.41	-0.2
3,462,392	-		AO353_15645	0.41	+1.9
3,462,414	+		AO353_15645	0.45	+0.4
3,462,415	-		AO353_15645	0.45	+3.1
3,462,528	+		AO353_15645	0.64	-1.1
3,462,639	-		AO353_15645	0.84	-0.2
3,462,693	+				-0.9
3,462,693	+				+2.0
3,462,693	+				-0.5
3,462,693	+				-0.1
3,462,693	+				-0.5
3,462,694	-				+0.8
3,462,719	+				-1.4
3,462,719	+				-0.3
3,462,719	+				-0.3
3,462,719	+				-0.2
3,462,719	+				-0.8
3,462,719	+				+0.5
3,462,719	+				+1.4
3,462,719	+				-0.5
3,462,719	+				-1.8
3,462,719	+				+0.8
3,462,719	+				+1.1
3,462,719	+				+1.2
3,462,719	+				+0.1
3,462,719	+				+1.5
3,462,719	+				+0.1
3,462,719	+				+0.0
3,462,720	-				-0.4
3,462,720	-				-0.5
3,462,720	-				-0.6
3,462,720	-				-1.2
3,462,720	-				+0.1
3,462,720	-				+1.1
3,462,720	-				-0.8
3,462,720	-				-0.3
3,462,720	-				-2.1
3,462,720	-				-0.5
3,462,720	-				-0.9
3,462,720	-				+0.4
3,462,720	-				+0.4
3,462,720	-				-1.2
3,462,720	-				-0.3
3,462,772	+				+0.2
3,462,829	+				-1.7
3,462,829	+				+1.1
3,462,829	+				+1.2
3,462,829	+				-1.1
3,462,830	-				-0.7
3,462,830	-				+0.3
3,462,830	-				-0.2
3,462,830	-				-1.5