Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12820

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
2,827,610	+		AO353_12815	0.59	+0.5
2,827,610	+		AO353_12815	0.59	+0.9
2,827,610	+		AO353_12815	0.59	+0.7
2,827,610	+		AO353_12815	0.59	+0.0
2,827,610	+		AO353_12815	0.59	+0.3
2,827,611	-		AO353_12815	0.59	-0.0
2,827,611	-		AO353_12815	0.59	+0.6
2,827,611	-		AO353_12815	0.59	+1.0
2,827,748	-		AO353_12815	0.69	-1.1
2,827,799	+		AO353_12815	0.72	-0.3
2,827,799	+		AO353_12815	0.72	-1.0
2,827,799	+		AO353_12815	0.72	+1.3
2,827,799	+		AO353_12815	0.72	+1.3
2,827,799	+		AO353_12815	0.72	-0.1
2,827,800	-		AO353_12815	0.72	-0.7
2,827,800	-		AO353_12815	0.72	+0.5
2,827,800	-		AO353_12815	0.72	+0.3
2,827,816	+		AO353_12815	0.73	-0.3
2,827,817	-		AO353_12815	0.73	+0.7
2,827,934	+		AO353_12815	0.81	-1.8
2,827,934	+		AO353_12815	0.81	+0.4
2,827,935	-		AO353_12815	0.81	+1.6
2,827,935	-		AO353_12815	0.81	+0.1
2,827,935	-		AO353_12815	0.81	-2.3
2,827,935	-		AO353_12815	0.81	+1.6
2,827,935	-		AO353_12815	0.81	-0.5
2,827,974	+		AO353_12815	0.84	-1.3
2,827,974	+		AO353_12815	0.84	+0.2
2,827,974	+		AO353_12815	0.84	+1.3
2,827,975	-		AO353_12815	0.84	+0.2
2,827,975	-		AO353_12815	0.84	+0.5
2,827,986	+		AO353_12815	0.85	+0.8
2,828,084	+				-0.0
2,828,085	-				-0.2
2,828,085	-				+1.3
2,828,123	-				+2.3
2,828,123	-				+1.3
2,828,232	-				-0.3
2,828,232	-				-0.2
2,828,246	+				+0.3
2,828,247	-				-0.6
2,828,336	+				+3.1
2,828,336	+				+0.2
2,828,336	+				-1.9
2,828,336	+				+1.3
2,828,336	+				-2.0
2,828,336	+				+2.3
2,828,336	+				-1.5
2,828,336	+				+0.7
2,828,336	+				+0.0
2,828,337	-				+1.3
2,828,337	-				-1.3
2,828,337	-				-1.3
2,828,340	+				-0.9
2,828,340	+				-0.1
2,828,340	+				+0.3
2,828,340	+				+0.3
2,828,340	+				+0.3
2,828,340	+				+1.1
2,828,341	-				+1.3
2,828,341	-				+0.5
2,828,341	-				-1.0
2,828,341	-				+1.8
2,828,341	-				+0.1
2,828,341	-				+0.4
2,828,350	-				+0.3
2,828,350	-				+0.9
2,828,350	-				+1.1
2,828,350	-				-1.7
2,828,355	+				-1.5
2,828,355	+				+1.3
2,828,356	-				-2.0
2,828,356	-				-0.1
2,828,356	-				+0.6
2,828,421	+				+2.5
2,828,422	-				-1.8
2,828,422	-				-0.1
2,828,422	-				-0.5
2,828,424	+				+0.0
2,828,424	+				+1.3
2,828,424	+				-1.5
2,828,424	+				+0.3
2,828,424	+				-1.3
2,828,424	+				-0.7
2,828,425	-				-1.6
2,828,425	-				+0.3
2,828,425	-				+0.3
2,828,425	-				-2.3
2,828,425	-				-1.2
2,828,425	-				-0.3
2,828,425	-				+1.4
2,828,580	+				+0.3
2,828,659	+				+2.2
2,828,660	-				-0.0
2,828,719	+				-0.1
2,828,848	+		AO353_12820	0.15	-0.3
2,828,848	+		AO353_12820	0.15	+0.6
2,828,849	-		AO353_12820	0.15	-1.8
2,828,849	-		AO353_12820	0.15	-0.3
2,828,849	-		AO353_12820	0.15	-1.1
2,828,886	+		AO353_12820	0.16	+1.0
2,828,886	+		AO353_12820	0.16	-0.9
2,828,886	+		AO353_12820	0.16	+2.2
2,828,886	+		AO353_12820	0.16	-2.1
2,828,887	-		AO353_12820	0.17	+0.8
2,828,887	-		AO353_12820	0.17	+0.6
2,828,887	-		AO353_12820	0.17	+0.7
2,828,887	-		AO353_12820	0.17	+0.3
2,828,887	-		AO353_12820	0.17	-1.8
2,828,887	-		AO353_12820	0.17	-1.4
2,828,887	-		AO353_12820	0.17	-0.1
2,828,954	+		AO353_12820	0.20	+1.0
2,828,955	-		AO353_12820	0.20	-1.8
2,828,955	-		AO353_12820	0.20	-1.8
2,828,971	+		AO353_12820	0.21	-0.7
2,828,971	+		AO353_12820	0.21	-1.1
2,828,971	+		AO353_12820	0.21	+1.7
2,828,972	-		AO353_12820	0.21	-0.9
2,828,972	-		AO353_12820	0.21	+3.8
2,828,987	-		AO353_12820	0.22	-0.1
2,829,021	+		AO353_12820	0.23	+1.0
2,829,055	+		AO353_12820	0.25	+0.3
2,829,055	+		AO353_12820	0.25	+0.3
2,829,142	+		AO353_12820	0.29	+1.0
2,829,143	-		AO353_12820	0.29	-1.4
2,829,143	-		AO353_12820	0.29	-1.7
2,829,143	-		AO353_12820	0.29	+1.2
2,829,143	-		AO353_12820	0.29	+0.9
2,829,239	-		AO353_12820	0.34	-0.4
2,829,294	+		AO353_12820	0.37	+0.3
2,829,491	+		AO353_12820	0.47	-0.3
2,829,602	+		AO353_12820	0.52	+1.6
2,829,602	+		AO353_12820	0.52	+1.9
2,829,602	+		AO353_12820	0.52	+0.1
2,829,602	+		AO353_12820	0.52	-0.5
2,829,603	-		AO353_12820	0.52	+1.3
2,829,603	-		AO353_12820	0.52	+0.9
2,829,830	+		AO353_12820	0.63	+1.7
2,829,988	+		AO353_12820	0.71	-0.3
2,829,989	-		AO353_12820	0.71	-0.7
2,830,033	+		AO353_12820	0.73	+0.8
2,830,033	+		AO353_12820	0.73	-0.5
2,830,034	-		AO353_12820	0.74	+1.1
2,830,067	+		AO353_12820	0.75	-1.5
2,830,067	+		AO353_12820	0.75	-1.3
2,830,067	+		AO353_12820	0.75	+0.9
2,830,067	+		AO353_12820	0.75	-1.3
2,830,067	+		AO353_12820	0.75	+0.5
2,830,067	+		AO353_12820	0.75	-0.2
2,830,067	+		AO353_12820	0.75	+0.8
2,830,067	+		AO353_12820	0.75	+0.3
2,830,068	-		AO353_12820	0.75	+1.9
2,830,068	-		AO353_12820	0.75	+0.3
2,830,068	-		AO353_12820	0.75	-0.5
2,830,068	-		AO353_12820	0.75	+2.9
2,830,208	+		AO353_12820	0.82	+2.7
2,830,724	+		AO353_12825	0.23	-1.3
2,830,724	+		AO353_12825	0.23	-1.7
2,830,724	+		AO353_12825	0.23	+0.1
2,830,725	-		AO353_12825	0.23	+0.9
2,830,725	-		AO353_12825	0.23	-2.0
2,830,751	+		AO353_12825	0.26	-0.3
2,830,751	+		AO353_12825	0.26	+0.5
2,830,752	-		AO353_12825	0.27	+3.7
2,830,752	-		AO353_12825	0.27	-0.2
2,830,752	-		AO353_12825	0.27	-1.3
2,830,879	+		AO353_12825	0.44	-0.6
2,830,880	-		AO353_12825	0.44	-1.7
2,830,880	-		AO353_12825	0.44	-1.1
2,830,894	-		AO353_12825	0.46	+0.2
2,830,912	-		AO353_12825	0.48	+0.2
2,830,937	+		AO353_12825	0.52	-1.0
2,830,938	-		AO353_12825	0.52	-1.0
2,830,938	-		AO353_12825	0.52	-0.3
2,830,938	-		AO353_12825	0.52	+0.3
2,830,938	-		AO353_12825	0.52	+2.9
2,830,938	-		AO353_12825	0.52	-0.5
2,830,938	-		AO353_12825	0.52	-1.0
2,831,175	-		AO353_12825	0.84	+0.3
2,831,175	-		AO353_12825	0.84	-1.6
2,831,199	+		AO353_12825	0.87	+0.6
2,831,199	+		AO353_12825	0.87	+0.7
2,831,199	+		AO353_12825	0.87	+0.7
2,831,334	+				-1.7
2,831,334	+				-0.4
2,831,334	+				+0.3
2,831,380	-				-1.3
2,831,380	-				-1.3
2,831,401	-				-1.3
2,831,563	+				-1.0
2,831,563	+				+0.7
2,831,564	-				+0.3
2,831,564	-				-0.7
2,831,564	-				+1.5