Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11525

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
2,546,285	+		AO353_11520	0.34	-0.6
2,546,285	+		AO353_11520	0.34	-1.8
2,546,285	+		AO353_11520	0.34	-0.2
2,546,285	+		AO353_11520	0.34	-1.6
2,546,285	+		AO353_11520	0.34	+1.8
2,546,285	+		AO353_11520	0.34	-0.6
2,546,285	+		AO353_11520	0.34	-0.7
2,546,285	+		AO353_11520	0.34	+0.2
2,546,285	+		AO353_11520	0.34	+0.5
2,546,285	+		AO353_11520	0.34	-2.3
2,546,285	+		AO353_11520	0.34	-1.1
2,546,285	+		AO353_11520	0.34	-0.2
2,546,286	-		AO353_11520	0.34	+0.1
2,546,286	-		AO353_11520	0.34	-1.3
2,546,286	-		AO353_11520	0.34	+0.5
2,546,286	-		AO353_11520	0.34	+2.6
2,546,286	-		AO353_11520	0.34	+0.4
2,546,286	-		AO353_11520	0.34	+1.8
2,546,286	-		AO353_11520	0.34	+0.4
2,546,286	-		AO353_11520	0.34	+0.2
2,546,494	+		AO353_11520	0.55	-1.2
2,546,495	-		AO353_11520	0.56	+1.7
2,546,585	+		AO353_11520	0.65	+1.0
2,546,642	+		AO353_11520	0.70	-0.5
2,546,642	+		AO353_11520	0.70	-0.0
2,546,642	+		AO353_11520	0.70	-1.4
2,546,642	+		AO353_11520	0.70	+0.2
2,546,643	-		AO353_11520	0.71	+1.1
2,546,643	-		AO353_11520	0.71	-1.2
2,546,643	-		AO353_11520	0.71	-0.6
2,546,643	-		AO353_11520	0.71	+3.3
2,546,684	+		AO353_11520	0.75	-0.2
2,546,685	-		AO353_11520	0.75	-0.2
2,546,685	-		AO353_11520	0.75	-2.4
2,546,685	-		AO353_11520	0.75	+1.1
2,546,729	+		AO353_11520	0.79	-1.8
2,546,729	+		AO353_11520	0.79	-1.4
2,546,729	+		AO353_11520	0.79	-1.5
2,546,729	+		AO353_11520	0.79	-0.9
2,546,730	-		AO353_11520	0.79	+1.4
2,546,744	+		AO353_11520	0.81	+0.1
2,546,744	+		AO353_11520	0.81	+0.1
2,546,744	+		AO353_11520	0.81	+0.3
2,546,744	+		AO353_11520	0.81	-0.2
2,546,745	-		AO353_11520	0.81	+0.9
2,546,745	-		AO353_11520	0.81	+1.8
2,546,745	-		AO353_11520	0.81	+1.2
2,546,745	-		AO353_11520	0.81	+1.4
2,546,745	-		AO353_11520	0.81	+0.7
2,546,745	-		AO353_11520	0.81	+1.4
2,546,745	-		AO353_11520	0.81	+0.3
2,546,745	-		AO353_11520	0.81	+3.2
2,546,908	+				-1.8
2,546,908	+				-0.6
2,546,909	-				+2.5
2,546,909	-				+0.1
2,546,925	+				-1.9
2,546,925	+				-1.3
2,546,926	-				+1.9
2,546,926	-				+1.6
2,546,926	-				+1.8
2,547,017	+				-0.6
2,547,018	-				+2.0
2,547,033	+				-1.0
2,547,033	+				+0.1
2,547,033	+				-2.7
2,547,033	+				-0.8
2,547,033	+				-3.1
2,547,033	+				-0.7
2,547,033	+				-1.3
2,547,033	+				+0.3
2,547,033	+				-1.8
2,547,033	+				-0.4
2,547,033	+				-1.3
2,547,033	+				-0.9
2,547,033	+				-0.2
2,547,033	+				+1.4
2,547,033	+				-0.9
2,547,033	+				-0.2
2,547,033	+				-2.0
2,547,033	+				-2.2
2,547,034	-				+2.2
2,547,034	-				+2.1
2,547,034	-				-2.4
2,547,034	-				+0.4
2,547,034	-				+1.2
2,547,034	-				+2.7
2,547,034	-				+1.4
2,547,034	-				+1.9
2,547,034	-				-0.3
2,547,078	+				+0.5
2,547,078	+				-1.8
2,547,078	+				-2.3
2,547,079	-				+1.1
2,547,079	-				+1.0
2,547,081	-				+2.4
2,547,114	+				+0.1
2,547,114	+				-0.8
2,547,114	+				-0.2
2,547,115	-				-1.6
2,547,115	-				+1.8
2,547,115	-				+0.7
2,547,199	+				-0.8
2,547,199	+				-1.2
2,547,200	-				-1.1
2,547,200	-				+1.5
2,547,200	-				+0.4
2,547,346	+		AO353_11525	0.14	-2.3
2,547,347	-		AO353_11525	0.14	-0.6
2,547,351	+		AO353_11525	0.15	-0.5
2,547,351	+		AO353_11525	0.15	-1.9
2,547,351	+		AO353_11525	0.15	-0.6
2,547,352	-		AO353_11525	0.15	+0.2
2,547,352	-		AO353_11525	0.15	+2.3
2,547,719	+		AO353_11525	0.46	-1.5
2,547,719	+		AO353_11525	0.46	-2.6
2,547,719	+		AO353_11525	0.46	-2.1
2,547,719	+		AO353_11525	0.46	+0.2
2,547,719	+		AO353_11525	0.46	-2.7
2,547,720	-		AO353_11525	0.46	+0.5
2,547,720	-		AO353_11525	0.46	+3.9
2,547,720	-		AO353_11525	0.46	+2.2
2,547,724	+		AO353_11525	0.46	-2.3
2,547,724	+		AO353_11525	0.46	-1.6
2,547,724	+		AO353_11525	0.46	-0.8
2,547,725	-		AO353_11525	0.46	+1.6
2,547,725	-		AO353_11525	0.46	-2.2
2,547,725	-		AO353_11525	0.46	+1.0
2,547,725	-		AO353_11525	0.46	+1.6
2,547,725	-		AO353_11525	0.46	-0.2
2,547,725	-		AO353_11525	0.46	+1.0
2,547,740	+		AO353_11525	0.47	-1.3
2,547,740	+		AO353_11525	0.47	-1.9
2,547,740	+		AO353_11525	0.47	-0.7
2,547,741	-		AO353_11525	0.48	-0.9
2,547,741	-		AO353_11525	0.48	+0.5
2,547,741	-		AO353_11525	0.48	+1.4
2,547,741	-		AO353_11525	0.48	+0.9
2,547,741	-		AO353_11525	0.48	+2.2
2,547,741	-		AO353_11525	0.48	+2.5
2,547,741	-		AO353_11525	0.48	+0.6
2,547,741	-		AO353_11525	0.48	+0.1
2,547,970	+		AO353_11525	0.67	-2.6
2,547,971	-		AO353_11525	0.67	+2.2
2,547,971	-		AO353_11525	0.67	+2.2
2,547,971	-		AO353_11525	0.67	-0.1
2,547,971	-		AO353_11525	0.67	+1.5
2,547,971	-		AO353_11525	0.67	-2.6
2,547,971	-		AO353_11525	0.67	+3.5
2,547,971	-		AO353_11525	0.67	+1.0
2,548,012	+		AO353_11525	0.71	-2.6
2,548,013	-		AO353_11525	0.71	-0.4
2,548,013	-		AO353_11525	0.71	+3.1
2,548,013	-		AO353_11525	0.71	-2.1
2,548,264	+				-0.4
2,548,264	+				-2.8
2,548,264	+				-0.8
2,548,264	+				-1.6
2,548,265	-				+2.6
2,548,265	-				+3.7
2,548,300	-				+0.4
2,548,341	+				-1.6
2,548,351	+				-2.3
2,548,352	-				+2.1
2,548,352	-				+3.1
2,548,358	+				+0.1
2,548,358	+				-0.6
2,548,358	+				-2.8
2,548,358	+				+0.4
2,548,358	+				-1.1
2,548,358	+				-0.6
2,548,358	+				-2.2
2,548,359	-				+1.7
2,548,359	-				+3.2
2,548,359	-				+2.6
2,548,359	-				-1.8
2,548,359	-				+2.1
2,548,359	-				+1.6
2,548,359	-				+1.4
2,548,359	-				+2.6
2,548,359	-				-0.9
2,548,359	-				+1.8
2,548,359	-				+2.5
2,548,359	-				+3.8
2,548,359	-				+0.1
2,548,359	-				+2.6
2,548,359	-				+3.0
2,548,359	-				+0.6
2,548,365	+				-2.4
2,548,365	+				-0.9
2,548,366	-				+3.7
2,548,366	-				+1.0
2,548,366	-				-1.4
2,548,366	-				+3.6
2,548,366	-				+3.6
2,548,401	+				-0.8
2,548,419	+				-1.2
2,548,419	+				-1.2
2,548,419	+				-0.6
2,548,419	+				-1.4
2,548,419	+				-2.1
2,548,419	+				-1.2
2,548,420	-				+0.4
2,548,420	-				+3.6
2,548,420	-				+4.6
2,548,420	-				+3.8
2,548,420	-				+4.8
2,548,441	+				-1.8
2,548,441	+				-1.6
2,548,441	+				+1.8
2,548,441	+				-1.4
2,548,441	+				-1.6
2,548,441	+				-0.2
2,548,441	+				+0.6
2,548,441	+				-2.6
2,548,441	+				-0.9
2,548,442	-				+2.4
2,548,442	-				+5.5
2,548,442	-				+4.4
2,548,442	-				+4.5
2,548,442	-				+4.2
2,548,463	+				-2.2
2,548,464	-				+2.4
2,548,464	-				-1.2
2,548,468	+				+0.4
2,548,468	+				+1.4
2,548,468	+				-1.1
2,548,469	-				+2.4
2,548,469	-				+1.7
2,548,470	+				-1.4
2,548,470	+				-1.4
2,548,471	-				+0.4
2,548,471	-				+3.5
2,548,488	+				-1.8
2,548,488	+				-0.7
2,548,489	-				+2.7
2,548,489	-				+1.3
2,548,520	-				+1.7
2,548,549	+				+6.1
2,548,549	+				+2.6
2,548,549	+				+1.2
2,548,549	+				+2.0
2,548,549	+				-1.2
2,548,550	-				+4.4
2,548,550	-				+4.1
2,548,550	-				+2.7
2,548,550	-				+3.7
2,548,550	-				+4.6
2,548,550	-				+4.6
2,548,588	+				-0.2
2,548,588	+				+2.6
2,548,589	-				+3.6
2,548,593	-				+2.1
2,548,593	-				+2.8
2,548,651	+				+2.9
2,548,652	-				+3.5
2,548,680	+				+3.2
2,548,680	+				+3.9
2,548,680	+				+2.6
2,548,680	+				+4.2
2,548,681	-				-0.6
2,548,681	-				+1.9
2,548,681	-				+5.0
2,548,855	-		AO353_11530	0.18	+2.9
2,548,939	+		AO353_11530	0.23	+0.4
2,548,939	+		AO353_11530	0.23	+2.8
2,548,939	+		AO353_11530	0.23	+1.9
2,548,940	-		AO353_11530	0.23	+3.6
2,548,940	-		AO353_11530	0.23	+1.4
2,548,940	-		AO353_11530	0.23	+3.6
2,549,077	+		AO353_11530	0.30	+2.7
2,549,077	+		AO353_11530	0.30	+0.8
2,549,077	+		AO353_11530	0.30	+2.4
2,549,077	+		AO353_11530	0.30	-0.9
2,549,077	+		AO353_11530	0.30	+2.4
2,549,078	-		AO353_11530	0.30	-2.1
2,549,078	-		AO353_11530	0.30	-0.2
2,549,078	-		AO353_11530	0.30	+2.1
2,549,078	-		AO353_11530	0.30	+3.4
2,549,078	-		AO353_11530	0.30	+4.9
2,549,295	+		AO353_11530	0.41	+2.6
2,549,296	-		AO353_11530	0.41	+4.0