Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10980

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
2,397,211	+		AO353_10975	0.47	-0.9
2,397,211	+		AO353_10975	0.47	-0.9
2,397,211	+		AO353_10975	0.47	-1.2
2,397,211	+		AO353_10975	0.47	-0.6
2,397,211	+		AO353_10975	0.47	+0.1
2,397,211	+		AO353_10975	0.47	+0.7
2,397,212	-		AO353_10975	0.47	-1.2
2,397,212	-		AO353_10975	0.47	+2.7
2,397,212	-		AO353_10975	0.47	-1.4
2,397,212	-		AO353_10975	0.47	+0.0
2,397,212	-		AO353_10975	0.47	+1.3
2,397,212	-		AO353_10975	0.47	-1.5
2,397,212	-		AO353_10975	0.47	+1.2
2,397,212	-		AO353_10975	0.47	-0.2
2,397,212	-		AO353_10975	0.47	+1.9
2,397,306	+		AO353_10975	0.52	-0.4
2,397,306	+		AO353_10975	0.52	+1.4
2,397,306	+		AO353_10975	0.52	-0.4
2,397,306	+		AO353_10975	0.52	-0.9
2,397,306	+		AO353_10975	0.52	+0.6
2,397,306	+		AO353_10975	0.52	+0.9
2,397,307	-		AO353_10975	0.52	+0.4
2,397,307	-		AO353_10975	0.52	-0.8
2,397,513	+		AO353_10975	0.64	-0.9
2,397,514	-		AO353_10975	0.64	-2.4
2,397,514	-		AO353_10975	0.64	+1.4
2,397,611	-		AO353_10975	0.69	+0.3
2,397,717	+		AO353_10975	0.75	+0.6
2,397,821	+		AO353_10975	0.81	-1.8
2,397,821	+		AO353_10975	0.81	+0.4
2,397,821	+		AO353_10975	0.81	+0.8
2,397,822	-		AO353_10975	0.81	-0.6
2,397,822	-		AO353_10975	0.81	+0.5
2,397,905	+		AO353_10975	0.86	+0.2
2,397,906	-		AO353_10975	0.86	+0.0
2,397,946	+		AO353_10975	0.88	-0.6
2,397,946	+		AO353_10975	0.88	-1.4
2,397,946	+		AO353_10975	0.88	-0.3
2,397,947	-		AO353_10975	0.88	-0.8
2,397,947	-		AO353_10975	0.88	+0.7
2,397,947	-		AO353_10975	0.88	-0.4
2,398,051	+				-1.4
2,398,078	+				+1.6
2,398,116	+				-0.9
2,398,117	-				+1.0
2,398,158	+				-1.8
2,398,158	+				+0.8
2,398,158	+				+0.9
2,398,158	+				+1.7
2,398,159	-				+0.4
2,398,159	-				-2.2
2,398,159	-				+0.5
2,398,159	-				+0.4
2,398,159	-				+1.4
2,398,159	-				+0.9
2,398,159	-				+0.2
2,398,159	-				-0.0
2,398,159	-				+0.8
2,398,159	-				-1.0
2,398,159	-				+0.1
2,398,159	-				-0.7
2,398,179	+				+1.7
2,398,179	+				+0.5
2,398,179	+				+0.8
2,398,180	-				-1.4
2,398,180	-				+1.2
2,398,180	-				+0.6
2,398,180	-				+0.1
2,398,180	-				-0.6
2,398,180	-				+0.5
2,398,197	+				-2.7
2,398,263	-				+1.2
2,398,498	-		AO353_10980	0.24	+2.0
2,398,498	-		AO353_10980	0.24	+0.7
2,398,713	+		AO353_10980	0.40	+0.8
2,398,713	+		AO353_10980	0.40	+1.4
2,398,713	+		AO353_10980	0.40	-0.3
2,398,714	-		AO353_10980	0.40	-0.2
2,398,792	+		AO353_10980	0.46	+1.0
2,398,792	+		AO353_10980	0.46	+0.1
2,398,792	+		AO353_10980	0.46	+0.4
2,398,793	-		AO353_10980	0.46	+0.1
2,398,793	-		AO353_10980	0.46	+0.4
2,398,793	-		AO353_10980	0.46	+1.1
2,398,793	-		AO353_10980	0.46	+1.3
2,398,793	-		AO353_10980	0.46	+1.9
2,398,793	-		AO353_10980	0.46	-0.9
2,398,793	-		AO353_10980	0.46	+0.9
2,398,793	-		AO353_10980	0.46	+0.9
2,398,793	-		AO353_10980	0.46	+0.0
2,398,793	-		AO353_10980	0.46	+1.8
2,398,825	+		AO353_10980	0.49	+0.3
2,398,826	-		AO353_10980	0.49	+0.1
2,398,826	-		AO353_10980	0.49	+1.6
2,398,826	-		AO353_10980	0.49	+0.5
2,398,844	-		AO353_10980	0.50	+1.4
2,398,998	-		AO353_10980	0.62	+1.4
2,399,005	+		AO353_10980	0.62	+1.5
2,399,005	+		AO353_10980	0.62	+0.8
2,399,006	-		AO353_10980	0.62	+0.0
2,399,006	-		AO353_10980	0.62	+1.0
2,399,006	-		AO353_10980	0.62	-1.1
2,399,006	-		AO353_10980	0.62	-3.5
2,399,199	+		AO353_10980	0.76	-0.6
2,399,199	+		AO353_10980	0.76	-0.8
2,399,199	+		AO353_10980	0.76	-0.4
2,399,200	-		AO353_10980	0.77	+0.1
2,399,200	-		AO353_10980	0.77	+0.5
2,399,221	+		AO353_10980	0.78	-0.1
2,399,222	-		AO353_10980	0.78	+1.6
2,399,267	+		AO353_10980	0.82	-2.4
2,399,416	+				-1.2
2,399,416	+				+0.8
2,399,416	+				-0.0
2,399,417	-				+0.2
2,399,417	-				-0.9
2,399,417	-				+0.9
2,399,418	+				-1.1
2,399,418	+				-0.4
2,399,418	+				+0.4
2,399,418	+				-0.1
2,399,418	+				+0.8
2,399,418	+				-0.8
2,399,419	-				-0.8
2,399,419	-				+0.5
2,399,419	-				+1.1
2,399,474	+				-1.9
2,399,474	+				+0.2
2,399,474	+				+0.1
2,399,475	-				+0.2
2,399,475	-				-0.2
2,399,475	-				+0.4
2,399,475	-				-0.1
2,399,475	-				-2.2
2,399,475	-				-0.8
2,399,523	-				-0.2
2,399,531	+				+1.8
2,399,532	-				+0.6
2,399,545	+				-0.9
2,399,545	+				-1.4
2,399,545	+				-0.4
2,399,545	+				-0.9
2,399,546	-				+0.2
2,399,546	-				-1.6
2,399,546	-				+0.4
2,399,550	+				-0.1
2,399,550	+				+0.3
2,399,551	-				-0.1
2,399,583	+				+0.9
2,399,583	+				-0.3
2,399,583	+				+1.4
2,399,583	+				+3.0
2,399,584	-				-0.6
2,399,636	-				-0.4
2,399,639	+				+0.6
2,399,640	-				-0.8
2,399,666	+				+1.7
2,399,721	+				+3.0
2,399,721	+				-0.9
2,399,721	+				+0.9
2,399,721	+				-0.3
2,399,721	+				-0.5
2,399,721	+				+1.1
2,399,721	+				+0.7
2,399,721	+				+0.4
2,399,721	+				+0.4
2,399,721	+				+3.0
2,399,721	+				-2.5
2,399,722	-				-2.5
2,399,722	-				+0.2
2,399,722	-				+0.1
2,399,722	-				+0.4
2,399,722	-				-0.3
2,399,722	-				-0.1
2,399,722	-				-2.3
2,399,722	-				+0.4
2,399,764	+				+0.4
2,399,765	-				-2.1
2,399,765	-				+0.2
2,399,827	-				-0.8
2,399,827	-				-0.2
2,399,827	-				-1.4
2,399,830	+				-0.4
2,399,892	+				+0.0
2,399,893	-				+0.2
2,399,909	-				+0.4
2,399,909	-				+0.9
2,399,989	-		AO353_10985	0.10	-0.9
2,399,989	-		AO353_10985	0.10	-0.4
2,400,004	-		AO353_10985	0.16	+2.1
2,400,147	-		AO353_10985	0.65	+1.1
2,400,244	+				+0.1
2,400,244	+				+1.4
2,400,244	+				-0.2
2,400,244	+				-0.9
2,400,244	+				+0.5
2,400,244	+				-0.4
2,400,244	+				+1.4
2,400,244	+				+2.1
2,400,244	+				-0.2
2,400,244	+				-1.0
2,400,245	-				-0.6
2,400,245	-				+0.6
2,400,245	-				+0.6
2,400,245	-				-0.2
2,400,245	-				+1.1
2,400,245	-				-0.9
2,400,245	-				+1.1
2,400,245	-				-0.6
2,400,245	-				-0.2
2,400,245	-				-1.6
2,400,245	-				-1.8
2,400,245	-				+0.0
2,400,248	+				+0.3
2,400,248	+				-0.8
2,400,249	-				+1.0
2,400,249	-				-0.8
2,400,249	-				-0.7
2,400,249	-				+1.4
2,400,249	-				+0.3
2,400,249	-				+0.8
2,400,249	-				+1.6
2,400,282	+				+0.4
2,400,282	+				-2.0
2,400,282	+				-1.2
2,400,282	+				+0.6
2,400,283	-				+0.4
2,400,283	-				+0.2
2,400,283	-				-1.2
2,400,283	-				-0.0
2,400,283	-				+0.4
2,400,294	+				+2.2
2,400,294	+				+0.4
2,400,294	+				-0.6
2,400,295	-				+0.2
2,400,295	-				+0.7
2,400,295	-				-0.9
2,400,298	+				-1.4
2,400,298	+				-1.6
2,400,299	-				+0.5
2,400,299	-				+0.6
2,400,299	-				-0.5
2,400,299	-				-0.8
2,400,299	-				-0.4
2,400,306	+				+1.7
2,400,337	+				-1.9
2,400,337	+				-1.4
2,400,350	-				+0.0