Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07890

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
1,741,071	+		AO353_07885	0.70	-0.5
1,741,071	+		AO353_07885	0.70	+0.1
1,741,071	+		AO353_07885	0.70	+0.7
1,741,071	+		AO353_07885	0.70	+0.3
1,741,071	+		AO353_07885	0.70	-2.1
1,741,071	+		AO353_07885	0.70	-0.1
1,741,071	+		AO353_07885	0.70	-0.1
1,741,072	-		AO353_07885	0.70	-1.3
1,741,072	-		AO353_07885	0.70	+0.3
1,741,072	-		AO353_07885	0.70	-0.9
1,741,072	-		AO353_07885	0.70	-1.5
1,741,072	-		AO353_07885	0.70	+0.0
1,741,072	-		AO353_07885	0.70	-0.3
1,741,072	-		AO353_07885	0.70	-0.1
1,741,072	-		AO353_07885	0.70	+0.3
1,741,072	-		AO353_07885	0.70	-1.3
1,741,072	-		AO353_07885	0.70	-0.1
1,741,072	-		AO353_07885	0.70	-1.9
1,741,377	+		AO353_07885	0.84	-0.8
1,741,377	+		AO353_07885	0.84	+0.7
1,741,378	-		AO353_07885	0.84	-0.3
1,741,399	-		AO353_07885	0.85	-1.1
1,741,559	+				-0.2
1,741,560	-				-0.7
1,741,560	-				-1.3
1,741,620	-				+2.9
1,741,620	-				+0.4
1,741,633	+				-0.7
1,741,633	+				+0.3
1,741,633	+				-0.7
1,741,634	-				-0.6
1,741,634	-				+0.3
1,741,667	+				-0.1
1,741,667	+				+2.1
1,741,668	-				+0.3
1,741,668	-				+1.5
1,741,668	-				-0.7
1,741,668	-				-0.2
1,741,668	-				+0.8
1,741,776	+				+0.0
1,741,776	+				-0.5
1,741,776	+				-1.9
1,741,777	-				+3.3
1,741,777	-				-0.3
1,741,799	+				-0.2
1,741,799	+				-2.1
1,741,799	+				-1.0
1,741,799	+				+1.3
1,741,846	-				+1.2
1,741,911	+				+0.3
1,741,929	+				+0.0
1,741,945	+				+0.1
1,741,945	+				+0.0
1,741,945	+				+0.6
1,741,946	-				+0.8
1,741,946	-				+1.8
1,741,946	-				+2.9
1,741,946	-				+0.3
1,741,946	-				+2.2
1,741,946	-				-1.5
1,741,946	-				-0.3
1,741,951	+				-0.1
1,741,952	-				+0.3
1,741,952	-				+0.7
1,741,952	-				-0.4
1,741,952	-				+1.4
1,741,953	+				-0.7
1,741,953	+				-1.7
1,741,953	+				-1.2
1,741,953	+				-1.2
1,741,953	+				+0.3
1,741,953	+				-1.3
1,741,953	+				+0.8
1,741,953	+				+0.7
1,741,954	-				+2.6
1,741,954	-				+1.0
1,741,954	-				-0.1
1,741,954	-				+2.1
1,741,954	-				+1.6
1,742,005	+				-1.6
1,742,005	+				+0.0
1,742,006	-				+0.9
1,742,079	+				-0.5
1,742,079	+				+0.0
1,742,079	+				+0.7
1,742,079	+				-1.5
1,742,079	+				-0.2
1,742,079	+				-1.1
1,742,080	-				+0.4
1,742,080	-				+2.1
1,742,080	-				-1.1
1,742,124	+		AO353_07890	0.14	-2.1
1,742,124	+		AO353_07890	0.14	+0.0
1,742,124	+		AO353_07890	0.14	+1.3
1,742,124	+		AO353_07890	0.14	-1.1
1,742,124	+		AO353_07890	0.14	-0.5
1,742,124	+		AO353_07890	0.14	-0.1
1,742,124	+		AO353_07890	0.14	-0.5
1,742,124	+		AO353_07890	0.14	+0.2
1,742,125	-		AO353_07890	0.14	-1.1
1,742,125	-		AO353_07890	0.14	+2.0
1,742,125	-		AO353_07890	0.14	+0.7
1,742,125	-		AO353_07890	0.14	+1.3
1,742,125	-		AO353_07890	0.14	+1.4
1,742,125	-		AO353_07890	0.14	-0.3
1,742,125	-		AO353_07890	0.14	+0.3
1,742,125	-		AO353_07890	0.14	-0.5
1,742,125	-		AO353_07890	0.14	+1.7
1,742,223	+		AO353_07890	0.29	-1.1
1,742,223	+		AO353_07890	0.29	+0.3
1,742,223	+		AO353_07890	0.29	-0.3
1,742,223	+		AO353_07890	0.29	+0.3
1,742,223	+		AO353_07890	0.29	-0.4
1,742,224	-		AO353_07890	0.29	+0.8
1,742,343	+		AO353_07890	0.47	+0.0
1,742,343	+		AO353_07890	0.47	+1.5
1,742,343	+		AO353_07890	0.47	+0.0
1,742,343	+		AO353_07890	0.47	-1.4
1,742,343	+		AO353_07890	0.47	-0.0
1,742,343	+		AO353_07890	0.47	-0.2
1,742,343	+		AO353_07890	0.47	+0.9
1,742,343	+		AO353_07890	0.47	+0.7
1,742,344	-		AO353_07890	0.47	+1.8
1,742,344	-		AO353_07890	0.47	+1.0
1,742,344	-		AO353_07890	0.47	+1.1
1,742,344	-		AO353_07890	0.47	+2.6
1,742,344	-		AO353_07890	0.47	+1.2
1,742,344	-		AO353_07890	0.47	-0.2
1,742,344	-		AO353_07890	0.47	-0.1
1,742,344	-		AO353_07890	0.47	-1.0
1,742,344	-		AO353_07890	0.47	-0.7
1,742,376	+		AO353_07890	0.52	-0.7
1,742,376	+		AO353_07890	0.52	-1.1
1,742,377	-		AO353_07890	0.52	+0.9
1,742,382	+		AO353_07890	0.53	-1.3
1,742,383	-		AO353_07890	0.53	+0.5
1,742,499	+		AO353_07890	0.70	+0.4
1,742,500	-		AO353_07890	0.70	+1.3
1,742,500	-		AO353_07890	0.70	+2.5
1,742,500	-		AO353_07890	0.70	+0.6
1,742,589	-		AO353_07890	0.83	+0.9
1,742,598	+		AO353_07890	0.85	-0.0
1,742,598	+		AO353_07890	0.85	-1.3
1,742,598	+		AO353_07890	0.85	-0.5
1,742,599	-		AO353_07890	0.85	+1.2
1,742,617	-		AO353_07890	0.88	+0.0
1,742,617	-		AO353_07890	0.88	+0.5
1,742,617	-		AO353_07890	0.88	+2.0
1,742,617	-		AO353_07890	0.88	+0.9
1,742,617	-		AO353_07890	0.88	+2.0
1,742,637	+				+0.9
1,742,678	+				+0.8
1,742,678	+				-1.4
1,742,678	+				+2.6
1,742,679	-				+0.3
1,742,679	-				+0.8
1,742,801	+				-0.9
1,743,070	+				+0.5
1,743,104	-				+0.1
1,743,156	-				-1.9
1,743,168	+				-0.7
1,743,168	+				+4.4
1,743,168	+				+0.6
1,743,168	+				-0.3
1,743,168	+				+0.7
1,743,168	+				-1.5
1,743,168	+				-1.1
1,743,168	+				+0.8
1,743,168	+				+1.3
1,743,168	+				-0.3
1,743,169	-				+0.3
1,743,169	-				-0.1
1,743,169	-				-0.7
1,743,169	-				+1.1
1,743,169	-				+1.3
1,743,169	-				+0.3
1,743,169	-				+0.3
1,743,169	-				+0.1
1,743,169	-				-0.3
1,743,187	+				+1.3
1,743,187	+				-1.5
1,743,188	-				-1.1
1,743,188	-				+0.3
1,743,230	+				-2.1
1,743,230	+				-0.5
1,743,230	+				+0.7
1,743,230	+				+1.3
1,743,230	+				-0.6
1,743,230	+				+1.3
1,743,231	-				-0.1
1,743,231	-				+0.5
1,743,231	-				+0.3
1,743,231	-				+1.0
1,743,231	-				-0.3
1,743,231	-				+1.9
1,743,231	-				-0.1
1,743,288	+				-0.6
1,743,288	+				-0.3
1,743,289	-				-0.5
1,743,337	+				+1.6
1,743,338	-				+0.9
1,743,338	-				+1.0
1,743,341	+				-0.8
1,743,341	+				-1.3
1,743,342	-				-0.6
1,743,342	-				-1.7
1,743,342	-				-0.3
1,743,342	-				-1.3
1,743,362	+				+0.5
1,743,362	+				+0.5
1,743,362	+				+0.9
1,743,362	+				+1.3
1,743,363	-				+1.5
1,743,363	-				-0.7
1,743,363	-				-0.0
1,743,498	+		AO353_07895	0.48	+1.0
1,743,498	+		AO353_07895	0.48	-2.4
1,743,498	+		AO353_07895	0.48	+1.3
1,743,498	+		AO353_07895	0.48	+0.7
1,743,499	-		AO353_07895	0.48	-0.5
1,743,499	-		AO353_07895	0.48	-0.7
1,743,499	-		AO353_07895	0.48	+1.1
1,743,535	-		AO353_07895	0.61	+0.3
1,743,656	-				-1.7
1,743,661	+				+0.7
1,743,661	+				-0.1
1,743,661	+				+1.3
1,743,661	+				-0.4
1,743,661	+				+0.3
1,743,661	+				+0.7
1,743,661	+				-0.1
1,743,661	+				-2.4
1,743,661	+				+0.6
1,743,661	+				+2.1
1,743,662	-				+0.5
1,743,662	-				+1.6
1,743,662	-				+0.5
1,743,662	-				-0.4
1,743,662	-				+1.3
1,743,662	-				-1.9
1,743,662	-				-1.3
1,743,662	-				+0.7
1,743,662	-				-1.1
1,743,662	-				+0.0
1,743,662	-				-1.7
1,743,662	-				+0.2
1,743,662	-				+2.6
1,743,662	-				-0.1
1,743,662	-				+1.0
1,743,663	+				-1.9
1,743,663	+				+0.0
1,743,663	+				+0.4
1,743,663	+				-0.3
1,743,663	+				-0.4
1,743,663	+				-0.9
1,743,663	+				+0.0
1,743,664	-				+1.3
1,743,664	-				+2.3
1,743,664	-				-0.9
1,743,664	-				+1.9