Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_06015

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
1,334,411	+		AO353_06010	0.36	+0.2
1,334,411	+		AO353_06010	0.36	-0.1
1,334,411	+		AO353_06010	0.36	-2.3
1,334,411	+		AO353_06010	0.36	-0.2
1,334,411	+		AO353_06010	0.36	-1.2
1,334,411	+		AO353_06010	0.36	-0.7
1,334,412	-		AO353_06010	0.36	+1.2
1,334,412	-		AO353_06010	0.36	-0.1
1,334,412	-		AO353_06010	0.36	-2.0
1,334,412	-		AO353_06010	0.36	+1.4
1,334,415	+		AO353_06010	0.36	+0.4
1,334,416	-		AO353_06010	0.36	+0.3
1,334,416	-		AO353_06010	0.36	-0.2
1,334,682	+		AO353_06010	0.57	-0.6
1,334,701	+		AO353_06010	0.59	+0.8
1,334,701	+		AO353_06010	0.59	+0.7
1,334,701	+		AO353_06010	0.59	-0.8
1,334,702	-		AO353_06010	0.59	+0.3
1,334,729	+		AO353_06010	0.61	-0.6
1,334,835	+		AO353_06010	0.70	-1.5
1,334,835	+		AO353_06010	0.70	-0.3
1,334,836	-		AO353_06010	0.70	+0.9
1,334,836	-		AO353_06010	0.70	+0.5
1,334,836	-		AO353_06010	0.70	-0.8
1,334,836	-		AO353_06010	0.70	-0.2
1,335,043	+		AO353_06010	0.86	-1.5
1,335,043	+		AO353_06010	0.86	+1.8
1,335,043	+		AO353_06010	0.86	-0.4
1,335,043	+		AO353_06010	0.86	-0.2
1,335,085	+		AO353_06010	0.89	-1.2
1,335,085	+		AO353_06010	0.89	+0.6
1,335,085	+		AO353_06010	0.89	-2.2
1,335,085	+		AO353_06010	0.89	-1.6
1,335,085	+		AO353_06010	0.89	-0.8
1,335,085	+		AO353_06010	0.89	+0.2
1,335,085	+		AO353_06010	0.89	-3.2
1,335,085	+		AO353_06010	0.89	-1.2
1,335,086	+		AO353_06010	0.89	-1.6
1,335,086	-		AO353_06010	0.89	-0.4
1,335,086	-		AO353_06010	0.89	+0.3
1,335,086	-		AO353_06010	0.89	-0.3
1,335,086	-		AO353_06010	0.89	-0.4
1,335,086	-		AO353_06010	0.89	-1.8
1,335,086	-		AO353_06010	0.89	-0.2
1,335,086	-		AO353_06010	0.89	-0.7
1,335,086	-		AO353_06010	0.89	+1.2
1,335,086	-		AO353_06010	0.89	-0.0
1,335,353	+		AO353_06015	0.23	-0.9
1,335,382	+		AO353_06015	0.28	-2.2
1,335,382	+		AO353_06015	0.28	-0.4
1,335,382	+		AO353_06015	0.28	+1.8
1,335,453	+		AO353_06015	0.41	+1.8
1,335,453	+		AO353_06015	0.41	-0.1
1,335,453	+		AO353_06015	0.41	-2.0
1,335,453	+		AO353_06015	0.41	-1.8
1,335,453	+		AO353_06015	0.41	-0.4
1,335,453	+		AO353_06015	0.41	-0.0
1,335,453	+		AO353_06015	0.41	-1.0
1,335,453	+		AO353_06015	0.41	+0.2
1,335,454	-		AO353_06015	0.41	+2.6
1,335,454	-		AO353_06015	0.41	+1.3
1,335,454	-		AO353_06015	0.41	-2.4
1,335,454	-		AO353_06015	0.41	+0.5
1,335,454	-		AO353_06015	0.41	+2.7
1,335,454	-		AO353_06015	0.41	+1.6
1,335,454	-		AO353_06015	0.41	+0.2
1,335,548	+		AO353_06015	0.57	-0.4
1,335,548	+		AO353_06015	0.57	+0.3
1,335,548	+		AO353_06015	0.57	+0.1
1,335,549	-		AO353_06015	0.57	+1.4
1,335,561	+		AO353_06015	0.60	+0.9
1,335,561	+		AO353_06015	0.60	+1.2
1,335,561	+		AO353_06015	0.60	-1.5
1,335,561	+		AO353_06015	0.60	-0.4
1,335,561	+		AO353_06015	0.60	-1.3
1,335,562	-		AO353_06015	0.60	+0.8
1,335,562	-		AO353_06015	0.60	-1.2
1,335,621	+		AO353_06015	0.70	+0.2
1,335,621	+		AO353_06015	0.70	+0.4
1,335,621	+		AO353_06015	0.70	-0.6
1,335,621	+		AO353_06015	0.70	+0.1
1,335,622	-		AO353_06015	0.70	-2.0
1,335,622	-		AO353_06015	0.70	+2.5
1,335,622	-		AO353_06015	0.70	+3.5
1,335,704	+		AO353_06015	0.84	+0.6
1,335,836	-				+0.8
1,335,871	+				+0.6
1,335,872	-				+1.7
1,335,878	-				+0.2
1,335,885	+				+0.8
1,335,886	-				+1.0
1,335,886	-				-1.4
1,335,886	-				+1.2
1,335,895	+				-0.3
1,335,909	-				+1.8
1,335,926	+				+4.2
1,335,952	+				-1.4
1,335,952	+				-1.4
1,335,952	+				+0.4
1,335,953	-				+1.2
1,335,953	-				+1.0
1,335,953	-				+0.4
1,335,993	+				+0.8
1,335,993	+				-1.2
1,335,993	+				-0.8
1,335,993	+				-0.8
1,335,993	+				+0.2
1,335,994	-				+1.5
1,335,994	-				-1.2
1,335,996	+				+1.2
1,335,996	+				-1.2
1,335,996	+				+0.4
1,335,996	+				+1.9
1,335,997	-				-0.8
1,335,997	-				+1.2
1,335,997	-				+1.5
1,335,997	-				-1.5
1,335,997	-				+1.3
1,335,997	-				+2.2
1,335,997	-				-0.4
1,335,997	-				-0.2
1,336,002	+				+0.6
1,336,002	+				+0.8
1,336,002	+				+1.3
1,336,002	+				-0.2
1,336,003	-				+0.3
1,336,003	-				+0.3
1,336,003	-				+1.4
1,336,003	-				+2.2
1,336,003	-				-0.4
1,336,003	-				+1.8
1,336,020	+				-0.2
1,336,020	+				-0.4
1,336,020	+				+0.1
1,336,020	+				-1.2
1,336,021	-				+1.7
1,336,021	-				+0.8
1,336,021	-				+0.9
1,336,021	-				+1.2
1,336,021	-				+2.8
1,336,021	-				+2.0
1,336,021	-				-0.6
1,336,021	-				+0.0
1,336,021	-				+1.2
1,336,021	-				+0.3
1,336,067	+				+0.7
1,336,116	+				+0.9
1,336,116	+				+0.9
1,336,116	+				+0.9
1,336,116	+				-2.0
1,336,117	-				+1.2
1,336,117	-				-1.8
1,336,117	-				+0.2
1,336,117	-				-0.2
1,336,117	-				+1.0
1,336,117	-				-1.4
1,336,157	+				+0.2
1,336,158	-				+0.6
1,336,158	-				+1.4
1,336,164	+				+0.2
1,336,177	+				+0.6
1,336,179	+				-0.4
1,336,179	+				-1.6
1,336,289	+		AO353_06020	0.17	-0.2
1,336,289	+		AO353_06020	0.17	+1.7
1,336,309	+		AO353_06020	0.19	-1.2
1,336,309	+		AO353_06020	0.19	+0.5
1,336,309	+		AO353_06020	0.19	+1.2
1,336,309	+		AO353_06020	0.19	+3.0
1,336,309	+		AO353_06020	0.19	+0.9
1,336,309	+		AO353_06020	0.19	+1.2
1,336,310	-		AO353_06020	0.19	+0.2
1,336,310	-		AO353_06020	0.19	-0.1
1,336,310	-		AO353_06020	0.19	+2.4
1,336,310	-		AO353_06020	0.19	-0.2
1,336,310	-				+0.2
1,336,333	+		AO353_06020	0.22	+0.2
1,336,333	+		AO353_06020	0.22	-0.6
1,336,333	+		AO353_06020	0.22	+0.4
1,336,333	+		AO353_06020	0.22	-0.8
1,336,333	+		AO353_06020	0.22	+1.2
1,336,334	-		AO353_06020	0.22	+0.6
1,336,334	-		AO353_06020	0.22	+0.5
1,336,334	-		AO353_06020	0.22	-1.2
1,336,334	-		AO353_06020	0.22	-1.2
1,336,595	+		AO353_06020	0.53	-0.4
1,336,697	+		AO353_06020	0.65	-0.5
1,336,697	+		AO353_06020	0.65	-0.4
1,336,697	+		AO353_06020	0.65	+1.8
1,336,698	-		AO353_06020	0.65	-2.0
1,336,698	-		AO353_06020	0.65	+1.4
1,336,698	-		AO353_06020	0.65	+1.4
1,336,698	-		AO353_06020	0.65	+0.2
1,336,704	+		AO353_06020	0.66	+1.4
1,336,705	-		AO353_06020	0.66	+0.8