Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05420

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
1,193,160	+		AO353_05410	0.70	-0.2
1,193,160	+		AO353_05410	0.70	-0.6
1,193,160	+		AO353_05410	0.70	-0.2
1,193,161	-		AO353_05410	0.70	-0.8
1,193,161	-		AO353_05410	0.70	-0.3
1,193,161	-		AO353_05410	0.70	+0.4
1,193,161	-		AO353_05410	0.70	-0.4
1,193,161	-		AO353_05410	0.70	-1.2
1,193,161	-		AO353_05410	0.70	-1.9
1,193,202	+		AO353_05410	0.74	-1.7
1,193,202	+		AO353_05410	0.74	-0.2
1,193,202	+		AO353_05410	0.74	-1.9
1,193,202	+		AO353_05410	0.74	+0.1
1,193,202	+		AO353_05410	0.74	-2.5
1,193,202	+		AO353_05410	0.74	-1.9
1,193,202	+		AO353_05410	0.74	-1.1
1,193,202	+		AO353_05410	0.74	-1.2
1,193,202	+		AO353_05410	0.74	+0.6
1,193,202	+		AO353_05410	0.74	+0.4
1,193,202	+		AO353_05410	0.74	+0.1
1,193,202	+		AO353_05410	0.74	-0.7
1,193,202	+		AO353_05410	0.74	+1.1
1,193,202	+		AO353_05410	0.74	+0.5
1,193,203	-		AO353_05410	0.74	+1.1
1,193,203	-		AO353_05410	0.74	+1.1
1,193,203	-		AO353_05410	0.74	-1.3
1,193,203	-		AO353_05410	0.74	-0.7
1,193,203	-		AO353_05410	0.74	+0.6
1,193,203	-		AO353_05410	0.74	+0.3
1,193,203	-		AO353_05410	0.74	-1.3
1,193,203	-		AO353_05410	0.74	+0.6
1,193,203	-		AO353_05410	0.74	-1.7
1,193,203	-		AO353_05410	0.74	+1.0
1,193,203	-		AO353_05410	0.74	+0.1
1,193,203	-		AO353_05410	0.74	+0.4
1,193,203	-		AO353_05410	0.74	+0.5
1,193,203	-		AO353_05410	0.74	+0.5
1,193,223	+		AO353_05410	0.77	-0.5
1,193,224	-		AO353_05410	0.77	-0.9
1,193,224	-		AO353_05410	0.77	-0.4
1,193,224	-		AO353_05410	0.77	+0.4
1,193,448	+				+0.3
1,193,625	-		AO353_05415	0.23	+3.9
1,193,625	-		AO353_05415	0.23	+0.2
1,193,775	+		AO353_05415	0.88	+0.4
1,193,775	+		AO353_05415	0.88	-2.1
1,193,776	-		AO353_05415	0.89	-1.7
1,193,801	+				+2.7
1,193,802	-				-1.5
1,193,802	-				-0.1
1,193,802	-				+0.1
1,193,802	-				+0.0
1,193,802	-				+0.7
1,193,802	-				-0.1
1,193,802	-				-1.1
1,193,821	+				+1.0
1,193,822	-				+0.2
1,193,822	-				+0.6
1,193,822	-				-2.1
1,193,836	+				-1.5
1,193,836	+				+0.7
1,193,836	+				+0.1
1,193,836	+				+0.1
1,193,837	-				+0.3
1,193,837	-				-0.5
1,193,837	-				-1.9
1,193,837	-				-1.0
1,193,840	+				+0.1
1,193,841	-				-1.0
1,193,849	+				-0.1
1,193,849	+				+0.6
1,193,850	-				-0.5
1,193,850	-				-0.1
1,193,850	-				+0.4
1,193,850	-				+0.1
1,193,850	-				-1.2
1,193,850	-				-1.1
1,193,850	-				-0.8
1,193,850	-				-2.5
1,193,850	-				-0.7
1,193,850	-				+0.6
1,193,864	+				+1.4
1,193,881	+				-1.5
1,193,882	-				-1.2
1,193,882	-				+0.9
1,193,890	+				+1.3
1,193,891	-				-2.1
1,193,891	-				-1.5
1,193,908	+				-1.1
1,193,908	+				+0.1
1,193,908	+				+1.8
1,193,908	+				-2.2
1,193,908	+				+0.9
1,193,908	+				-3.0
1,193,909	-				-1.2
1,193,909	-				-0.3
1,193,909	-				-1.2
1,193,909	-				-1.3
1,193,909	-				+0.8
1,193,917	-				-0.9
1,193,986	-				+1.1
1,193,986	-				-0.5
1,193,986	-				-1.2
1,193,986	-				-1.5
1,194,020	+				-2.2
1,194,020	+				+0.3
1,194,021	-				-0.3
1,194,037	+				+0.4
1,194,037	+				+0.3
1,194,037	+				+1.1
1,194,038	-				+1.5
1,194,038	-				+0.1
1,194,038	-				-1.3
1,194,056	+				+0.5
1,194,057	-				-0.7
1,194,057	-				+0.3
1,194,057	-				+0.2
1,194,057	-				+0.7
1,194,073	+				+0.1
1,194,073	+				-0.2
1,194,074	-				-0.4
1,194,074	-				-1.5
1,194,080	+				-1.9
1,194,080	+				+0.1
1,194,080	+				-2.8
1,194,080	+				+0.1
1,194,080	+				+1.0
1,194,080	+				+0.4
1,194,080	+				+0.3
1,194,080	+				-0.4
1,194,081	-				+1.1
1,194,081	-				-1.7
1,194,081	-				+0.1
1,194,081	-				+0.8
1,194,081	-				+0.5
1,194,081	-				-0.6
1,194,081	-				+1.1
1,194,081	-				+1.1
1,194,081	-				-0.5
1,194,081	-				+1.1
1,194,081	-				-1.2
1,194,135	+				-0.9
1,194,135	+				+0.1
1,194,135	+				-0.9
1,194,136	-				+1.3
1,194,142	+				+0.7
1,194,142	+				-0.8
1,194,142	+				-0.1
1,194,142	+				-0.8
1,194,143	-				-0.6
1,194,143	-				-1.1
1,194,143	-				+0.4
1,194,143	-				+0.5
1,194,364	+		AO353_05420	0.14	+1.1
1,194,365	-		AO353_05420	0.14	-1.5
1,194,776	+		AO353_05420	0.40	-1.2
1,195,165	+				+1.1
1,195,433	-		AO353_05420	0.82	-1.6
1,195,768	-				+1.4
1,195,784	+				-1.2
1,195,784	+				-0.1
1,195,785	-				+0.3
1,195,785	-				-0.1
1,195,785	-				-0.2
1,195,785	-				+2.0
1,195,785	-				-0.2
1,195,805	+				-0.1
1,195,805	+				+1.1
1,195,806	-				-1.9
1,195,806	-				+0.5
1,195,878	+				+0.4
1,195,878	+				+1.1
1,195,878	+				+1.1
1,195,878	+				-0.2
1,195,879	-				+2.4
1,195,879	-				+0.3
1,195,879	-				+1.8
1,195,879	-				-1.5
1,195,879	-				-0.4
1,195,879	-				-0.5
1,195,879	-				+1.1
1,195,880	+				-1.1
1,195,880	+				-0.6
1,195,898	+				+1.7
1,195,976	+				-1.2
1,195,976	+				+0.5
1,195,976	+				+1.4
1,195,976	+				-0.5
1,195,976	+				+0.1
1,195,977	-				+2.1
1,195,977	-				-1.0
1,195,977	-				-1.3
1,195,977	-				-1.6
1,195,977	-				-0.1
1,195,977	-				-0.3
1,195,977	-				+0.1
1,195,977	-				-0.9
1,195,984	-				+1.3
1,195,999	+				+0.6
1,195,999	+				-0.5
1,196,000	-				+0.7
1,196,052	+				-0.7
1,196,052	+				+0.7
1,196,053	-				+0.7
1,196,053	-				-1.3
1,196,083	+				+0.7
1,196,083	+				-1.0
1,196,083	+				-0.5
1,196,156	+				-0.5
1,196,156	+				+0.3
1,196,156	+				-1.2
1,196,156	+				-0.6
1,196,157	-				-0.6
1,196,157	-				+0.6
1,196,157	-				+0.3
1,196,157	-				-0.3
1,196,157	-				-0.8
1,196,195	+				-0.5
1,196,196	-				+0.5
1,196,196	-				-2.0
1,196,196	-				-2.8
1,196,196	-				-0.4
1,196,196	-				-1.8
1,196,196	-				+0.1
1,196,196	-				+0.1
1,196,196	-				+0.7
1,196,239	-				+0.1
1,196,239	-				+1.1
1,196,239	-				+0.8
1,196,330	+		AO353_05425	0.17	+0.3
1,196,331	-		AO353_05425	0.17	-0.3
1,196,331	-		AO353_05425	0.17	-0.5
1,196,331	-		AO353_05425	0.17	+0.5
1,196,512	-		AO353_05425	0.42	+1.1
1,196,585	+		AO353_05425	0.52	+0.4
1,196,585	+		AO353_05425	0.52	-0.9
1,196,585	+		AO353_05425	0.52	-0.9
1,196,585	+		AO353_05425	0.52	+0.5
1,196,585	+		AO353_05425	0.52	+2.8
1,196,585	+		AO353_05425	0.52	+0.7
1,196,585	+		AO353_05425	0.52	-1.5
1,196,585	+		AO353_05425	0.52	+2.7
1,196,585	+		AO353_05425	0.52	-0.5
1,196,586	-		AO353_05425	0.52	-0.7
1,196,586	-		AO353_05425	0.52	+0.1
1,196,586	-		AO353_05425	0.52	-1.7