Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2863

Experiment: D-Alanine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (C)
3,210,429	+				-2.4
3,210,429	+				-1.4
3,210,430	-				-0.4
3,210,441	+				+2.6
3,210,441	+				-0.9
3,210,441	+				+0.1
3,210,441	+				+0.1
3,210,441	+				-0.2
3,210,441	+				+1.1
3,210,441	+				+0.5
3,210,441	+				-2.2
3,210,441	+				+0.1
3,210,441	+				+0.7
3,210,441	+				-0.0
3,210,441	+				-0.2
3,210,442	-				-0.9
3,210,442	-				+1.1
3,210,442	-				+0.3
3,210,442	-				+1.7
3,210,513	+				+1.7
3,210,638	+				+0.1
3,210,639	-				+0.9
3,210,639	-				-1.2
3,210,639	-				+1.1
3,210,639	-				+1.5
3,210,639	-				-0.4
3,211,102	-				-2.2
3,211,102	-				+1.0
3,211,102	-				-0.0
3,211,275	+				-0.9
3,211,275	+				+0.1
3,211,284	+				-1.4
3,211,285	-				+0.7
3,211,301	+				+1.1
3,211,301	+				-1.2
3,211,302	-				+0.5
3,211,302	-				+1.5
3,211,328	+				-0.9
3,211,328	+				+2.0
3,211,328	+				+0.1
3,211,328	+				-0.3
3,211,329	-				-0.4
3,211,329	-				-0.6
3,211,329	-				+0.6
3,211,329	-				-0.6
3,211,329	-				-0.4
3,211,329	-				+0.1
3,211,329	-				+0.4
3,211,329	-				+0.7
3,211,329	-				-0.4
3,211,329	-				-0.6
3,211,329	-				+2.5
3,211,330	+				+0.9
3,211,330	+				+0.7
3,211,330	+				+0.4
3,211,331	-				+1.1
3,211,331	-				+1.1
3,211,331	-				+0.7
3,211,331	-				+0.1
3,211,348	+				+0.6
3,211,348	+				+0.3
3,211,348	+				-1.2
3,211,349	-				+0.7
3,211,376	+				-0.4
3,211,377	-				+0.4
3,211,400	+				-0.9
3,211,401	-				-0.9
3,211,401	-				+0.1
3,211,401	-				-1.7
3,211,401	-				-1.2
3,211,401	-				-1.9
3,211,401	-				-0.3
3,211,401	-				-0.3
3,211,424	+				-3.3
3,211,425	-				+1.1
3,211,425	-				+2.1
3,211,425	-				-2.4
3,211,656	-		Pf1N1B4_2863	0.21	-0.3
3,211,759	+		Pf1N1B4_2863	0.30	+1.1
3,211,759	+		Pf1N1B4_2863	0.30	-0.9
3,211,759	+		Pf1N1B4_2863	0.30	-0.3
3,211,759	+		Pf1N1B4_2863	0.30	+0.1
3,212,030	+				-1.9
3,212,030	+		Pf1N1B4_2863	0.53	-0.1
3,212,030	+		Pf1N1B4_2863	0.53	-0.9
3,212,030	+		Pf1N1B4_2863	0.53	+1.7
3,212,030	+		Pf1N1B4_2863	0.53	-0.9
3,212,030	+		Pf1N1B4_2863	0.53	-0.7
3,212,030	+		Pf1N1B4_2863	0.53	+0.1
3,212,030	+		Pf1N1B4_2863	0.53	+1.1
3,212,031	-		Pf1N1B4_2863	0.53	+0.8
3,212,031	-		Pf1N1B4_2863	0.53	+1.4
3,212,031	-		Pf1N1B4_2863	0.53	-1.4
3,212,046	-		Pf1N1B4_2863	0.54	-0.2
3,212,102	-		Pf1N1B4_2863	0.59	+0.6
3,212,114	+		Pf1N1B4_2863	0.60	+0.8
3,212,114	+		Pf1N1B4_2863	0.60	-2.7
3,212,115	-		Pf1N1B4_2863	0.60	-0.6
3,212,151	+		Pf1N1B4_2863	0.63	-0.7
3,212,152	-		Pf1N1B4_2863	0.63	+1.1
3,212,152	-		Pf1N1B4_2863	0.63	-1.9
3,212,201	+		Pf1N1B4_2863	0.67	+2.1
3,212,202	-		Pf1N1B4_2863	0.67	+0.9
3,212,202	-		Pf1N1B4_2863	0.67	-0.3
3,212,202	-		Pf1N1B4_2863	0.67	+0.7
3,212,373	-		Pf1N1B4_2863	0.82	+1.1
3,212,373	-		Pf1N1B4_2863	0.82	-0.5
3,212,510	+				-0.4
3,212,629	+				+0.8
3,212,766	+		Pf1N1B4_2864	0.25	+0.7
3,212,920	+		Pf1N1B4_2864	0.47	-0.3
3,212,977	+		Pf1N1B4_2864	0.55	+0.4
3,212,977	+		Pf1N1B4_2864	0.55	+1.5
3,212,977	+		Pf1N1B4_2864	0.55	-0.9
3,212,977	+		Pf1N1B4_2864	0.55	-0.3
3,212,977	+		Pf1N1B4_2864	0.55	+0.7
3,212,977	+		Pf1N1B4_2864	0.55	-2.0
3,212,977	+				+0.1
3,212,977	+		Pf1N1B4_2864	0.55	-1.0
3,212,977	+		Pf1N1B4_2864	0.55	-1.4
3,212,977	+		Pf1N1B4_2864	0.55	+0.1
3,212,977	+		Pf1N1B4_2864	0.55	-0.4
3,212,977	+		Pf1N1B4_2864	0.55	+0.1
3,212,977	+		Pf1N1B4_2864	0.55	+2.5
3,212,977	+				+0.1
3,212,977	+		Pf1N1B4_2864	0.55	-0.2
3,212,978	-		Pf1N1B4_2864	0.55	+0.1
3,212,978	-		Pf1N1B4_2864	0.55	-0.4
3,212,978	-		Pf1N1B4_2864	0.55	+0.1
3,212,978	-		Pf1N1B4_2864	0.55	+0.5
3,212,978	-		Pf1N1B4_2864	0.55	+0.1
3,212,978	-		Pf1N1B4_2864	0.55	+0.6
3,212,978	-		Pf1N1B4_2864	0.55	+0.8
3,212,978	-		Pf1N1B4_2864	0.55	+0.1
3,213,118	+		Pf1N1B4_2864	0.75	-0.1
3,213,118	+		Pf1N1B4_2864	0.75	+1.1
3,213,118	+		Pf1N1B4_2864	0.75	-0.2
3,213,119	-		Pf1N1B4_2864	0.75	-0.5
3,213,119	-				+1.5
3,213,119	-		Pf1N1B4_2864	0.75	+0.1
3,213,119	-		Pf1N1B4_2864	0.75	+0.7
3,213,119	-		Pf1N1B4_2864	0.75	-1.4
3,213,119	-		Pf1N1B4_2864	0.75	+0.1
3,213,119	-		Pf1N1B4_2864	0.75	+0.1
3,213,229	+				-1.2
3,213,229	+				-0.6
3,213,230	-				+0.9
3,213,287	+				+0.4
3,213,508	+		Pf1N1B4_2865	0.67	-0.3
3,213,508	+		Pf1N1B4_2865	0.67	-0.4
3,213,508	+		Pf1N1B4_2865	0.67	-0.4
3,213,508	+		Pf1N1B4_2865	0.67	+0.9
3,213,508	+		Pf1N1B4_2865	0.67	-2.4
3,213,508	+		Pf1N1B4_2865	0.67	+1.4
3,213,508	+		Pf1N1B4_2865	0.67	-0.9
3,213,508	+		Pf1N1B4_2865	0.67	+0.7
3,213,508	+		Pf1N1B4_2865	0.67	+1.1
3,213,508	+		Pf1N1B4_2865	0.67	+0.1
3,213,508	+		Pf1N1B4_2865	0.67	+0.9
3,213,508	+		Pf1N1B4_2865	0.67	+0.1
3,213,508	+		Pf1N1B4_2865	0.67	+2.0
3,213,508	+				+1.7
3,213,509	-		Pf1N1B4_2865	0.68	-2.0
3,213,509	-		Pf1N1B4_2865	0.68	-0.4
3,213,509	-		Pf1N1B4_2865	0.68	-0.6
3,213,509	-		Pf1N1B4_2865	0.68	+1.3
3,213,509	-		Pf1N1B4_2865	0.68	-1.4
3,213,509	-		Pf1N1B4_2865	0.68	+0.1
3,213,509	-		Pf1N1B4_2865	0.68	+0.6
3,213,509	-		Pf1N1B4_2865	0.68	-0.6
3,213,509	-		Pf1N1B4_2865	0.68	+0.5
3,213,509	-		Pf1N1B4_2865	0.68	+1.7
3,213,509	-		Pf1N1B4_2865	0.68	+1.1
3,213,509	-		Pf1N1B4_2865	0.68	+0.7