Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06574 and H281DRAFT_06575 are separated by 296 nucleotides H281DRAFT_06575 and H281DRAFT_06576 overlap by 8 nucleotides H281DRAFT_06576 and H281DRAFT_06577 overlap by 30 nucleotides H281DRAFT_06577 and H281DRAFT_06578 are separated by 174 nucleotides
H281DRAFT_06574: H281DRAFT_06574 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 14,781 to 16,310
_06574
H281DRAFT_06575: H281DRAFT_06575 - PAS domain S-box-containing protein, at 16,607 to 18,796
_06575
H281DRAFT_06576: H281DRAFT_06576 - CheY chemotaxis protein or a CheY-like REC (receiver) domain, at 18,789 to 19,160
_06576
H281DRAFT_06577: H281DRAFT_06577 - hypothetical protein, at 19,131 to 19,541
_06577
H281DRAFT_06578: H281DRAFT_06578 - NADP-dependent 3-hydroxy acid dehydrogenase YdfG, at 19,716 to 20,573
_06578
Position (kb) 16
17
18
19 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 15.653 kb on + strand, within H281DRAFT_06574 at 15.653 kb on + strand, within H281DRAFT_06574 at 15.738 kb on - strand, within H281DRAFT_06574 at 15.738 kb on - strand, within H281DRAFT_06574 at 15.829 kb on - strand, within H281DRAFT_06574 at 15.903 kb on + strand, within H281DRAFT_06574 at 16.115 kb on + strand, within H281DRAFT_06574 at 16.115 kb on + strand, within H281DRAFT_06574 at 16.196 kb on + strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.197 kb on - strand at 16.351 kb on - strand at 16.351 kb on - strand at 16.515 kb on + strand at 16.516 kb on - strand at 16.537 kb on - strand at 16.537 kb on - strand at 16.557 kb on + strand at 16.558 kb on - strand at 16.970 kb on - strand, within H281DRAFT_06575 at 16.970 kb on - strand, within H281DRAFT_06575 at 16.970 kb on - strand, within H281DRAFT_06575 at 17.107 kb on + strand, within H281DRAFT_06575 at 17.108 kb on - strand, within H281DRAFT_06575 at 17.171 kb on - strand, within H281DRAFT_06575 at 17.183 kb on + strand, within H281DRAFT_06575 at 17.184 kb on - strand, within H281DRAFT_06575 at 17.242 kb on - strand, within H281DRAFT_06575 at 17.242 kb on - strand, within H281DRAFT_06575 at 17.363 kb on - strand, within H281DRAFT_06575 at 17.363 kb on - strand, within H281DRAFT_06575 at 17.450 kb on + strand, within H281DRAFT_06575 at 17.451 kb on - strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.576 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.615 kb on + strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.616 kb on - strand, within H281DRAFT_06575 at 17.628 kb on + strand, within H281DRAFT_06575 at 17.648 kb on + strand, within H281DRAFT_06575 at 17.648 kb on + strand, within H281DRAFT_06575 at 17.649 kb on - strand, within H281DRAFT_06575 at 17.693 kb on + strand, within H281DRAFT_06575 at 17.694 kb on - strand, within H281DRAFT_06575 at 17.694 kb on - strand, within H281DRAFT_06575 at 17.855 kb on + strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.882 kb on - strand, within H281DRAFT_06575 at 17.888 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.100 kb on + strand, within H281DRAFT_06575 at 18.101 kb on - strand, within H281DRAFT_06575 at 18.400 kb on + strand, within H281DRAFT_06575 at 18.401 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.413 kb on - strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.527 kb on + strand, within H281DRAFT_06575 at 18.598 kb on + strand at 18.607 kb on + strand at 18.607 kb on + strand at 18.608 kb on - strand at 18.608 kb on - strand at 18.609 kb on + strand at 18.610 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.691 kb on - strand at 18.788 kb on + strand at 18.789 kb on - strand at 18.933 kb on - strand, within H281DRAFT_06576 at 19.044 kb on + strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.045 kb on - strand, within H281DRAFT_06576 at 19.117 kb on + strand at 19.145 kb on + strand at 19.145 kb on + strand at 19.146 kb on - strand at 19.159 kb on - strand at 19.339 kb on + strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.340 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.436 kb on - strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.483 kb on + strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.484 kb on - strand, within H281DRAFT_06577 at 19.542 kb on - strand at 19.638 kb on - strand at 19.721 kb on + strand at 19.721 kb on + strand at 19.722 kb on - strand at 19.758 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 15,653 + H281DRAFT_06574 0.57 +0.1 15,653 + H281DRAFT_06574 0.57 +0.4 15,738 - H281DRAFT_06574 0.63 -2.4 15,738 - H281DRAFT_06574 0.63 -0.6 15,829 - H281DRAFT_06574 0.68 +0.3 15,903 + H281DRAFT_06574 0.73 +0.3 16,115 + H281DRAFT_06574 0.87 +1.1 16,115 + H281DRAFT_06574 0.87 +0.5 16,196 + +0.3 16,197 - -0.3 16,197 - -0.0 16,197 - +0.5 16,197 - -1.5 16,351 - -0.4 16,351 - -0.0 16,515 + -2.9 16,516 - -2.1 16,537 - +0.3 16,537 - -0.3 16,557 + +1.2 16,558 - +1.1 16,970 - H281DRAFT_06575 0.17 +0.0 16,970 - H281DRAFT_06575 0.17 +0.7 16,970 - H281DRAFT_06575 0.17 +1.9 17,107 + H281DRAFT_06575 0.23 +1.2 17,108 - H281DRAFT_06575 0.23 -0.5 17,171 - H281DRAFT_06575 0.26 -0.6 17,183 + H281DRAFT_06575 0.26 +0.7 17,184 - H281DRAFT_06575 0.26 +2.1 17,242 - H281DRAFT_06575 0.29 -0.1 17,242 - H281DRAFT_06575 0.29 +0.1 17,363 - H281DRAFT_06575 0.35 -0.1 17,363 - H281DRAFT_06575 0.35 +0.3 17,450 + H281DRAFT_06575 0.38 +0.2 17,451 - H281DRAFT_06575 0.39 +1.0 17,576 + H281DRAFT_06575 0.44 +0.1 17,576 + H281DRAFT_06575 0.44 -0.3 17,576 + H281DRAFT_06575 0.44 +0.4 17,615 + H281DRAFT_06575 0.46 +0.3 17,615 + H281DRAFT_06575 0.46 -0.6 17,615 + H281DRAFT_06575 0.46 -0.2 17,616 - H281DRAFT_06575 0.46 +0.1 17,616 - H281DRAFT_06575 0.46 +0.8 17,616 - H281DRAFT_06575 0.46 -0.3 17,628 + H281DRAFT_06575 0.47 +1.1 17,648 + H281DRAFT_06575 0.48 -0.0 17,648 + H281DRAFT_06575 0.48 +0.3 17,649 - H281DRAFT_06575 0.48 -0.4 17,693 + H281DRAFT_06575 0.50 -0.2 17,694 - H281DRAFT_06575 0.50 -1.0 17,694 - H281DRAFT_06575 0.50 -1.2 17,855 + H281DRAFT_06575 0.57 +1.5 17,882 - H281DRAFT_06575 0.58 +0.0 17,882 - H281DRAFT_06575 0.58 -0.1 17,888 + H281DRAFT_06575 0.58 -0.1 18,100 + H281DRAFT_06575 0.68 -0.4 18,100 + H281DRAFT_06575 0.68 +0.1 18,100 + H281DRAFT_06575 0.68 +0.2 18,101 - H281DRAFT_06575 0.68 +0.7 18,400 + H281DRAFT_06575 0.82 +0.7 18,401 - H281DRAFT_06575 0.82 +0.4 18,413 - H281DRAFT_06575 0.82 +0.8 18,413 - H281DRAFT_06575 0.82 -0.6 18,527 + H281DRAFT_06575 0.88 +0.2 18,527 + H281DRAFT_06575 0.88 +2.7 18,598 + +0.1 18,607 + +1.4 18,607 + +0.7 18,608 - -0.2 18,608 - -1.2 18,609 + -0.6 18,610 - -1.4 18,691 - +0.6 18,691 - +0.5 18,691 - -1.7 18,788 + -1.0 18,789 - -0.1 18,933 - H281DRAFT_06576 0.39 +1.1 19,044 + H281DRAFT_06576 0.69 +0.1 19,045 - H281DRAFT_06576 0.69 -0.4 19,045 - H281DRAFT_06576 0.69 +2.3 19,117 + -1.2 19,145 + +0.0 19,145 + +0.4 19,146 - +0.6 19,159 - -1.4 19,339 + H281DRAFT_06577 0.51 -0.2 19,340 - H281DRAFT_06577 0.51 -0.1 19,340 - H281DRAFT_06577 0.51 +1.2 19,436 - H281DRAFT_06577 0.74 +0.9 19,436 - H281DRAFT_06577 0.74 -0.7 19,483 + H281DRAFT_06577 0.86 +0.6 19,483 + H281DRAFT_06577 0.86 +1.0 19,483 + H281DRAFT_06577 0.86 +0.6 19,484 - H281DRAFT_06577 0.86 +0.4 19,484 - H281DRAFT_06577 0.86 +0.1 19,484 - H281DRAFT_06577 0.86 +0.3 19,542 - +0.8 19,638 - -1.0 19,721 + +0.5 19,721 + +1.0 19,722 - -0.9 19,758 - -1.8
Or see this region's nucleotide sequence