Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06509 and H281DRAFT_06510 are separated by 338 nucleotides H281DRAFT_06510 and H281DRAFT_06511 are separated by 145 nucleotides H281DRAFT_06511 and H281DRAFT_06512 are separated by 236 nucleotides
H281DRAFT_06509: H281DRAFT_06509 - hypothetical protein, at 56,651 to 57,133
_06509
H281DRAFT_06510: H281DRAFT_06510 - methyl-accepting chemotaxis protein, at 57,472 to 59,037
_06510
H281DRAFT_06511: H281DRAFT_06511 - reactive intermediate/imine deaminase, at 59,183 to 59,587
_06511
H281DRAFT_06512: H281DRAFT_06512 - hippurate hydrolase, at 59,824 to 61,035
_06512
Position (kb) 57
58
59
60 Strain fitness (log2 ratio) -2
-1
0
1
2 at 56.494 kb on + strand at 56.681 kb on - strand at 56.814 kb on - strand, within H281DRAFT_06509 at 57.290 kb on + strand at 57.440 kb on - strand at 57.713 kb on - strand, within H281DRAFT_06510 at 57.907 kb on + strand, within H281DRAFT_06510 at 58.330 kb on - strand, within H281DRAFT_06510 at 59.185 kb on - strand at 59.329 kb on - strand, within H281DRAFT_06511 at 59.696 kb on - strand at 59.712 kb on - strand at 59.867 kb on + strand at 59.868 kb on - strand at 59.868 kb on - strand at 59.990 kb on + strand, within H281DRAFT_06512 at 59.990 kb on + strand, within H281DRAFT_06512 at 59.990 kb on + strand, within H281DRAFT_06512 at 59.991 kb on - strand, within H281DRAFT_06512
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 56,494 + +1.8 56,681 - -0.4 56,814 - H281DRAFT_06509 0.34 +0.4 57,290 + +0.3 57,440 - -0.0 57,713 - H281DRAFT_06510 0.15 -0.0 57,907 + H281DRAFT_06510 0.28 +0.9 58,330 - H281DRAFT_06510 0.55 +1.1 59,185 - -1.4 59,329 - H281DRAFT_06511 0.36 +0.3 59,696 - -0.2 59,712 - +1.3 59,867 + -0.2 59,868 - +0.3 59,868 - -2.3 59,990 + H281DRAFT_06512 0.14 -0.7 59,990 + H281DRAFT_06512 0.14 -1.2 59,990 + H281DRAFT_06512 0.14 +0.0 59,991 - H281DRAFT_06512 0.14 -0.5
Or see this region's nucleotide sequence