Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06389 and H281DRAFT_06390 are separated by 92 nucleotides H281DRAFT_06390 and H281DRAFT_06391 overlap by 10 nucleotides H281DRAFT_06391 and H281DRAFT_06392 overlap by 1 nucleotides H281DRAFT_06392 and H281DRAFT_06393 overlap by 4 nucleotides
H281DRAFT_06389: H281DRAFT_06389 - Predicted metal-dependent hydrolase, TIM-barrel fold, at 61,646 to 62,536
_06389
H281DRAFT_06390: H281DRAFT_06390 - tRNA_Val_GAC, at 62,629 to 62,705
_06390
H281DRAFT_06391: H281DRAFT_06391 - hypothetical protein, at 62,696 to 62,788
_06391
H281DRAFT_06392: H281DRAFT_06392 - Microcystin degradation protein MlrC, contains DUF1485 domain, at 62,788 to 64,287
_06392
H281DRAFT_06393: H281DRAFT_06393 - N-carbamoyl-L-amino-acid hydrolase, at 64,284 to 65,582
_06393
Position (kb) 62
63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 61.831 kb on + strand, within H281DRAFT_06389 at 61.831 kb on + strand, within H281DRAFT_06389 at 61.872 kb on + strand, within H281DRAFT_06389 at 61.872 kb on + strand, within H281DRAFT_06389 at 61.873 kb on - strand, within H281DRAFT_06389 at 61.951 kb on + strand, within H281DRAFT_06389 at 61.952 kb on - strand, within H281DRAFT_06389 at 62.258 kb on - strand, within H281DRAFT_06389 at 62.360 kb on + strand, within H281DRAFT_06389 at 62.361 kb on - strand, within H281DRAFT_06389 at 62.361 kb on - strand, within H281DRAFT_06389 at 62.379 kb on - strand, within H281DRAFT_06389 at 62.466 kb on - strand at 62.563 kb on - strand at 62.790 kb on - strand at 62.790 kb on - strand at 62.939 kb on + strand, within H281DRAFT_06392 at 62.940 kb on - strand, within H281DRAFT_06392 at 63.061 kb on - strand, within H281DRAFT_06392 at 63.104 kb on + strand, within H281DRAFT_06392 at 63.105 kb on - strand, within H281DRAFT_06392 at 63.125 kb on + strand, within H281DRAFT_06392 at 63.125 kb on + strand at 63.559 kb on - strand, within H281DRAFT_06392 at 63.745 kb on + strand, within H281DRAFT_06392 at 63.745 kb on + strand, within H281DRAFT_06392 at 63.789 kb on - strand, within H281DRAFT_06392 at 63.792 kb on + strand, within H281DRAFT_06392 at 63.792 kb on + strand at 63.792 kb on + strand, within H281DRAFT_06392 at 63.793 kb on - strand, within H281DRAFT_06392 at 63.807 kb on - strand, within H281DRAFT_06392 at 63.980 kb on - strand, within H281DRAFT_06392 at 64.288 kb on - strand at 64.469 kb on - strand, within H281DRAFT_06393 at 64.761 kb on + strand, within H281DRAFT_06393 at 65.035 kb on + strand, within H281DRAFT_06393 at 65.208 kb on - strand, within H281DRAFT_06393
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 61,831 + H281DRAFT_06389 0.21 +0.8 61,831 + H281DRAFT_06389 0.21 +0.6 61,872 + H281DRAFT_06389 0.25 +0.5 61,872 + H281DRAFT_06389 0.25 +0.1 61,873 - H281DRAFT_06389 0.25 -0.4 61,951 + H281DRAFT_06389 0.34 +0.6 61,952 - H281DRAFT_06389 0.34 +0.3 62,258 - H281DRAFT_06389 0.69 +0.3 62,360 + H281DRAFT_06389 0.80 +1.3 62,361 - H281DRAFT_06389 0.80 +0.1 62,361 - H281DRAFT_06389 0.80 +0.1 62,379 - H281DRAFT_06389 0.82 +1.0 62,466 - -0.4 62,563 - +1.1 62,790 - -0.3 62,790 - -2.1 62,939 + H281DRAFT_06392 0.10 +0.1 62,940 - H281DRAFT_06392 0.10 +0.3 63,061 - H281DRAFT_06392 0.18 +0.1 63,104 + H281DRAFT_06392 0.21 -1.1 63,105 - H281DRAFT_06392 0.21 +0.5 63,125 + H281DRAFT_06392 0.22 +0.0 63,125 + +2.9 63,559 - H281DRAFT_06392 0.51 +2.7 63,745 + H281DRAFT_06392 0.64 +0.8 63,745 + H281DRAFT_06392 0.64 +0.6 63,789 - H281DRAFT_06392 0.67 -0.0 63,792 + H281DRAFT_06392 0.67 +0.4 63,792 + -0.5 63,792 + H281DRAFT_06392 0.67 +0.3 63,793 - H281DRAFT_06392 0.67 +0.9 63,807 - H281DRAFT_06392 0.68 -1.4 63,980 - H281DRAFT_06392 0.79 +0.3 64,288 - -0.6 64,469 - H281DRAFT_06393 0.14 -2.1 64,761 + H281DRAFT_06393 0.37 -2.1 65,035 + H281DRAFT_06393 0.58 -0.2 65,208 - H281DRAFT_06393 0.71 +0.4
Or see this region's nucleotide sequence