Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06308 and H281DRAFT_06309 are separated by 420 nucleotides H281DRAFT_06309 and H281DRAFT_06310 are separated by 16 nucleotides H281DRAFT_06310 and H281DRAFT_06311 are separated by 207 nucleotides H281DRAFT_06311 and H281DRAFT_06312 are separated by 19 nucleotides
H281DRAFT_06308: H281DRAFT_06308 - malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+), at 90,820 to 93,159
_06308
H281DRAFT_06309: H281DRAFT_06309 - ribonuclease T1, at 93,580 to 93,996
_06309
H281DRAFT_06310: H281DRAFT_06310 - Barstar (barnase inhibitor), at 94,013 to 94,573
_06310
H281DRAFT_06311: H281DRAFT_06311 - 16S rRNA (uracil1498-N3)-methyltransferase, at 94,781 to 95,521
_06311
H281DRAFT_06312: H281DRAFT_06312 - Uncharacterized conserved protein PhnB, glyoxalase superfamily, at 95,541 to 95,987
_06312
Position (kb) 94
95 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 93.170 kb on - strand at 93.208 kb on + strand at 93.397 kb on + strand at 93.404 kb on - strand at 93.522 kb on + strand at 93.546 kb on - strand at 93.559 kb on + strand at 93.560 kb on - strand at 93.560 kb on - strand at 93.625 kb on - strand, within H281DRAFT_06309 at 93.625 kb on - strand, within H281DRAFT_06309 at 93.676 kb on + strand at 93.753 kb on + strand, within H281DRAFT_06309 at 93.753 kb on + strand, within H281DRAFT_06309 at 93.753 kb on + strand, within H281DRAFT_06309 at 93.753 kb on + strand at 93.753 kb on + strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.754 kb on - strand, within H281DRAFT_06309 at 93.784 kb on + strand at 93.865 kb on + strand, within H281DRAFT_06309 at 93.865 kb on + strand, within H281DRAFT_06309 at 93.865 kb on + strand, within H281DRAFT_06309 at 93.865 kb on + strand, within H281DRAFT_06309 at 93.866 kb on - strand, within H281DRAFT_06309 at 93.866 kb on - strand, within H281DRAFT_06309 at 93.892 kb on - strand, within H281DRAFT_06309 at 93.949 kb on + strand, within H281DRAFT_06309 at 93.953 kb on - strand, within H281DRAFT_06309 at 93.967 kb on + strand at 93.968 kb on - strand at 93.968 kb on - strand at 93.968 kb on - strand at 93.979 kb on - strand at 93.984 kb on + strand at 93.984 kb on + strand at 93.984 kb on + strand at 94.028 kb on + strand at 94.028 kb on + strand at 94.210 kb on - strand, within H281DRAFT_06310 at 94.210 kb on - strand, within H281DRAFT_06310 at 94.210 kb on - strand, within H281DRAFT_06310 at 94.281 kb on - strand, within H281DRAFT_06310 at 94.286 kb on + strand, within H281DRAFT_06310 at 94.287 kb on - strand, within H281DRAFT_06310 at 94.333 kb on + strand, within H281DRAFT_06310 at 94.333 kb on + strand, within H281DRAFT_06310 at 94.334 kb on - strand, within H281DRAFT_06310 at 94.371 kb on - strand, within H281DRAFT_06310 at 94.371 kb on - strand, within H281DRAFT_06310 at 94.371 kb on - strand at 94.408 kb on + strand, within H281DRAFT_06310 at 94.559 kb on + strand at 94.743 kb on - strand at 95.273 kb on + strand, within H281DRAFT_06311 at 95.273 kb on + strand at 95.274 kb on - strand, within H281DRAFT_06311 at 95.274 kb on - strand, within H281DRAFT_06311 at 95.274 kb on - strand, within H281DRAFT_06311 at 95.274 kb on - strand, within H281DRAFT_06311 at 95.274 kb on - strand, within H281DRAFT_06311 at 95.382 kb on + strand, within H281DRAFT_06311 at 95.382 kb on + strand, within H281DRAFT_06311 at 95.383 kb on - strand, within H281DRAFT_06311 at 95.383 kb on - strand, within H281DRAFT_06311 at 95.383 kb on - strand, within H281DRAFT_06311 at 95.411 kb on + strand, within H281DRAFT_06311 at 95.412 kb on - strand, within H281DRAFT_06311 at 95.530 kb on + strand at 95.531 kb on - strand at 95.537 kb on + strand at 95.538 kb on - strand at 95.538 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 93,170 - -0.6 93,208 + +0.4 93,397 + +0.9 93,404 - +0.0 93,522 + +0.6 93,546 - +0.9 93,559 + -0.5 93,560 - +3.2 93,560 - +0.9 93,625 - H281DRAFT_06309 0.11 +0.5 93,625 - H281DRAFT_06309 0.11 +0.6 93,676 + +2.5 93,753 + H281DRAFT_06309 0.41 +0.0 93,753 + H281DRAFT_06309 0.41 -0.3 93,753 + H281DRAFT_06309 0.41 -0.6 93,753 + -0.8 93,753 + H281DRAFT_06309 0.41 -0.1 93,754 - H281DRAFT_06309 0.42 +1.5 93,754 - H281DRAFT_06309 0.42 -0.4 93,754 - H281DRAFT_06309 0.42 +0.5 93,754 - H281DRAFT_06309 0.42 -0.8 93,754 - H281DRAFT_06309 0.42 +1.5 93,754 - H281DRAFT_06309 0.42 +0.5 93,754 - H281DRAFT_06309 0.42 +0.6 93,784 + +1.2 93,865 + H281DRAFT_06309 0.68 -1.5 93,865 + H281DRAFT_06309 0.68 +0.1 93,865 + H281DRAFT_06309 0.68 -0.1 93,865 + H281DRAFT_06309 0.68 -0.0 93,866 - H281DRAFT_06309 0.69 +1.3 93,866 - H281DRAFT_06309 0.69 +0.6 93,892 - H281DRAFT_06309 0.75 +1.5 93,949 + H281DRAFT_06309 0.88 +0.4 93,953 - H281DRAFT_06309 0.89 +1.0 93,967 + +0.1 93,968 - -0.8 93,968 - +1.5 93,968 - +2.8 93,979 - +0.8 93,984 + +0.4 93,984 + +0.3 93,984 + -0.5 94,028 + +1.4 94,028 + +0.4 94,210 - H281DRAFT_06310 0.35 +0.8 94,210 - H281DRAFT_06310 0.35 +1.5 94,210 - H281DRAFT_06310 0.35 +1.5 94,281 - H281DRAFT_06310 0.48 +0.7 94,286 + H281DRAFT_06310 0.49 -1.2 94,287 - H281DRAFT_06310 0.49 +1.4 94,333 + H281DRAFT_06310 0.57 +1.2 94,333 + H281DRAFT_06310 0.57 -1.3 94,334 - H281DRAFT_06310 0.57 +1.7 94,371 - H281DRAFT_06310 0.64 +2.4 94,371 - H281DRAFT_06310 0.64 +2.2 94,371 - -0.8 94,408 + H281DRAFT_06310 0.70 +0.8 94,559 + -1.0 94,743 - -2.9 95,273 + H281DRAFT_06311 0.66 -0.6 95,273 + -0.2 95,274 - H281DRAFT_06311 0.67 +0.5 95,274 - H281DRAFT_06311 0.67 -0.2 95,274 - H281DRAFT_06311 0.67 -0.4 95,274 - H281DRAFT_06311 0.67 +0.1 95,274 - H281DRAFT_06311 0.67 +2.2 95,382 + H281DRAFT_06311 0.81 -0.6 95,382 + H281DRAFT_06311 0.81 +0.6 95,383 - H281DRAFT_06311 0.81 +1.6 95,383 - H281DRAFT_06311 0.81 -0.5 95,383 - H281DRAFT_06311 0.81 +0.8 95,411 + H281DRAFT_06311 0.85 +0.3 95,412 - H281DRAFT_06311 0.85 +0.4 95,530 + +1.6 95,531 - +0.5 95,537 + -0.2 95,538 - -2.7 95,538 - +0.7
Or see this region's nucleotide sequence