Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06113 and H281DRAFT_06114 are separated by 272 nucleotides H281DRAFT_06114 and H281DRAFT_06115 are separated by 144 nucleotides H281DRAFT_06115 and H281DRAFT_06116 are separated by 73 nucleotides
H281DRAFT_06113: H281DRAFT_06113 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 132,625 to 134,001
_06113
H281DRAFT_06114: H281DRAFT_06114 - Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family, at 134,274 to 134,525
_06114
H281DRAFT_06115: H281DRAFT_06115 - Protein of unknown function (DUF1479), at 134,670 to 135,920
_06115
H281DRAFT_06116: H281DRAFT_06116 - transcriptional regulator, AraC family, at 135,994 to 137,157
_06116
Position (kb) 134
135
136 Strain fitness (log2 ratio) -2
-1
0
1
2 at 133.950 kb on - strand at 133.953 kb on + strand at 133.954 kb on - strand at 133.954 kb on - strand at 133.954 kb on - strand at 133.954 kb on - strand at 134.088 kb on + strand at 134.088 kb on + strand at 134.195 kb on - strand at 134.235 kb on + strand at 134.250 kb on + strand at 134.250 kb on + strand at 134.251 kb on - strand at 134.409 kb on + strand, within H281DRAFT_06114 at 134.433 kb on + strand, within H281DRAFT_06114 at 134.500 kb on - strand at 134.632 kb on + strand at 134.632 kb on + strand at 134.860 kb on + strand, within H281DRAFT_06115 at 134.860 kb on + strand, within H281DRAFT_06115 at 134.860 kb on + strand, within H281DRAFT_06115 at 134.861 kb on - strand, within H281DRAFT_06115 at 134.861 kb on - strand, within H281DRAFT_06115 at 134.861 kb on - strand, within H281DRAFT_06115 at 134.861 kb on - strand, within H281DRAFT_06115 at 134.875 kb on + strand, within H281DRAFT_06115 at 135.082 kb on + strand, within H281DRAFT_06115 at 135.241 kb on + strand, within H281DRAFT_06115 at 135.241 kb on + strand, within H281DRAFT_06115 at 135.515 kb on - strand, within H281DRAFT_06115 at 135.515 kb on - strand, within H281DRAFT_06115 at 135.515 kb on - strand, within H281DRAFT_06115 at 135.515 kb on - strand, within H281DRAFT_06115 at 135.515 kb on - strand, within H281DRAFT_06115 at 135.559 kb on + strand, within H281DRAFT_06115 at 135.560 kb on - strand, within H281DRAFT_06115 at 135.560 kb on - strand, within H281DRAFT_06115 at 135.613 kb on + strand, within H281DRAFT_06115 at 135.743 kb on - strand, within H281DRAFT_06115 at 135.743 kb on - strand, within H281DRAFT_06115 at 135.743 kb on - strand, within H281DRAFT_06115 at 135.844 kb on + strand at 135.844 kb on + strand at 135.844 kb on + strand at 135.845 kb on - strand at 135.911 kb on + strand at 135.911 kb on + strand at 135.912 kb on - strand at 135.912 kb on - strand at 135.912 kb on - strand at 135.935 kb on - strand at 135.969 kb on + strand at 135.969 kb on + strand at 135.970 kb on - strand at 135.999 kb on + strand at 136.000 kb on - strand at 136.000 kb on - strand at 136.000 kb on - strand at 136.079 kb on - strand at 136.120 kb on + strand, within H281DRAFT_06116 at 136.121 kb on - strand, within H281DRAFT_06116 at 136.121 kb on - strand, within H281DRAFT_06116 at 136.278 kb on + strand, within H281DRAFT_06116 at 136.278 kb on + strand, within H281DRAFT_06116 at 136.579 kb on - strand, within H281DRAFT_06116 at 136.844 kb on - strand, within H281DRAFT_06116 at 136.844 kb on - strand, within H281DRAFT_06116 at 136.879 kb on + strand, within H281DRAFT_06116 at 136.880 kb on - strand, within H281DRAFT_06116 at 136.884 kb on - strand, within H281DRAFT_06116 at 136.884 kb on - strand, within H281DRAFT_06116
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 133,950 - +0.6 133,953 + +0.4 133,954 - +0.3 133,954 - -0.4 133,954 - -0.5 133,954 - -0.4 134,088 + -0.9 134,088 + +0.9 134,195 - -0.2 134,235 + +0.3 134,250 + -0.5 134,250 + -0.3 134,251 - +1.0 134,409 + H281DRAFT_06114 0.54 -0.3 134,433 + H281DRAFT_06114 0.63 +0.2 134,500 - -1.2 134,632 + +0.6 134,632 + +0.8 134,860 + H281DRAFT_06115 0.15 +0.8 134,860 + H281DRAFT_06115 0.15 +1.4 134,860 + H281DRAFT_06115 0.15 +1.6 134,861 - H281DRAFT_06115 0.15 -0.5 134,861 - H281DRAFT_06115 0.15 +0.7 134,861 - H281DRAFT_06115 0.15 -1.2 134,861 - H281DRAFT_06115 0.15 +0.4 134,875 + H281DRAFT_06115 0.16 +0.6 135,082 + H281DRAFT_06115 0.33 -0.2 135,241 + H281DRAFT_06115 0.46 -1.6 135,241 + H281DRAFT_06115 0.46 +0.5 135,515 - H281DRAFT_06115 0.68 -1.8 135,515 - H281DRAFT_06115 0.68 -0.1 135,515 - H281DRAFT_06115 0.68 +1.3 135,515 - H281DRAFT_06115 0.68 +1.8 135,515 - H281DRAFT_06115 0.68 +0.6 135,559 + H281DRAFT_06115 0.71 +0.8 135,560 - H281DRAFT_06115 0.71 -1.8 135,560 - H281DRAFT_06115 0.71 -0.1 135,613 + H281DRAFT_06115 0.75 +0.0 135,743 - H281DRAFT_06115 0.86 -0.2 135,743 - H281DRAFT_06115 0.86 +0.2 135,743 - H281DRAFT_06115 0.86 -0.7 135,844 + +0.6 135,844 + -0.1 135,844 + +0.1 135,845 - -0.2 135,911 + +0.4 135,911 + -0.3 135,912 - +0.7 135,912 - -0.8 135,912 - -0.5 135,935 - +0.5 135,969 + +0.1 135,969 + +0.7 135,970 - -0.2 135,999 + +0.2 136,000 - +0.3 136,000 - -0.2 136,000 - +0.3 136,079 - +0.5 136,120 + H281DRAFT_06116 0.11 +1.4 136,121 - H281DRAFT_06116 0.11 +0.2 136,121 - H281DRAFT_06116 0.11 -0.2 136,278 + H281DRAFT_06116 0.24 +0.7 136,278 + H281DRAFT_06116 0.24 -0.6 136,579 - H281DRAFT_06116 0.50 +0.1 136,844 - H281DRAFT_06116 0.73 +0.3 136,844 - H281DRAFT_06116 0.73 -0.4 136,879 + H281DRAFT_06116 0.76 +0.6 136,880 - H281DRAFT_06116 0.76 +0.1 136,884 - H281DRAFT_06116 0.76 -0.8 136,884 - H281DRAFT_06116 0.76 +1.6
Or see this region's nucleotide sequence