Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06018 and H281DRAFT_06019 are separated by 160 nucleotides H281DRAFT_06019 and H281DRAFT_06020 are separated by 186 nucleotides
H281DRAFT_06018: H281DRAFT_06018 - choline monooxygenase, at 21,467 to 22,573
_06018
H281DRAFT_06019: H281DRAFT_06019 - thiosulfate/3-mercaptopyruvate sulfurtransferase, at 22,734 to 23,603
_06019
H281DRAFT_06020: H281DRAFT_06020 - carboxymethylenebutenolidase, at 23,790 to 24,662
_06020
Position (kb)
22
23
24 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 21.761 kb on - strand, within H281DRAFT_06018 at 21.761 kb on - strand, within H281DRAFT_06018 at 21.788 kb on + strand, within H281DRAFT_06018 at 21.788 kb on + strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.789 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 21.999 kb on - strand, within H281DRAFT_06018 at 22.025 kb on + strand, within H281DRAFT_06018 at 22.026 kb on - strand, within H281DRAFT_06018 at 22.037 kb on + strand, within H281DRAFT_06018 at 22.038 kb on - strand, within H281DRAFT_06018 at 22.116 kb on - strand, within H281DRAFT_06018 at 22.116 kb on - strand, within H281DRAFT_06018 at 22.172 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.247 kb on + strand, within H281DRAFT_06018 at 22.248 kb on - strand, within H281DRAFT_06018 at 22.248 kb on - strand, within H281DRAFT_06018 at 22.250 kb on + strand, within H281DRAFT_06018 at 22.251 kb on - strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.346 kb on + strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.347 kb on - strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.406 kb on + strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.407 kb on - strand, within H281DRAFT_06018 at 22.650 kb on - strand at 22.654 kb on + strand at 22.654 kb on + strand at 22.655 kb on - strand at 22.655 kb on - strand at 22.749 kb on + strand at 22.749 kb on + strand at 22.750 kb on - strand at 22.750 kb on - strand at 22.896 kb on + strand, within H281DRAFT_06019 at 22.896 kb on + strand, within H281DRAFT_06019 at 22.896 kb on + strand, within H281DRAFT_06019 at 22.937 kb on + strand, within H281DRAFT_06019 at 23.049 kb on + strand, within H281DRAFT_06019 at 23.049 kb on + strand at 23.050 kb on - strand, within H281DRAFT_06019 at 23.249 kb on + strand, within H281DRAFT_06019 at 23.249 kb on + strand at 23.399 kb on + strand, within H281DRAFT_06019 at 23.400 kb on - strand, within H281DRAFT_06019 at 23.425 kb on + strand, within H281DRAFT_06019 at 23.602 kb on - strand at 23.668 kb on + strand at 23.668 kb on + strand at 23.668 kb on + strand at 23.669 kb on - strand at 23.678 kb on + strand at 23.678 kb on + strand at 23.678 kb on + strand at 23.860 kb on + strand at 23.861 kb on - strand at 23.906 kb on - strand, within H281DRAFT_06020 at 23.932 kb on - strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.065 kb on + strand, within H281DRAFT_06020 at 24.066 kb on - strand, within H281DRAFT_06020 at 24.097 kb on + strand, within H281DRAFT_06020 at 24.355 kb on + strand, within H281DRAFT_06020 at 24.392 kb on + strand, within H281DRAFT_06020 at 24.393 kb on - strand, within H281DRAFT_06020 at 24.428 kb on + strand, within H281DRAFT_06020
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 21,761 - H281DRAFT_06018 0.27 +0.3 21,761 - H281DRAFT_06018 0.27 -0.7 21,788 + H281DRAFT_06018 0.29 +0.4 21,788 + H281DRAFT_06018 0.29 -0.4 21,789 - H281DRAFT_06018 0.29 -0.4 21,789 - H281DRAFT_06018 0.29 -0.7 21,789 - H281DRAFT_06018 0.29 -0.4 21,999 - H281DRAFT_06018 0.48 +0.4 21,999 - H281DRAFT_06018 0.48 -2.7 21,999 - H281DRAFT_06018 0.48 -0.3 21,999 - H281DRAFT_06018 0.48 -0.9 22,025 + H281DRAFT_06018 0.50 -0.1 22,026 - H281DRAFT_06018 0.50 +0.0 22,037 + H281DRAFT_06018 0.51 -0.8 22,038 - H281DRAFT_06018 0.52 -0.9 22,116 - H281DRAFT_06018 0.59 -0.9 22,116 - H281DRAFT_06018 0.59 -0.6 22,172 + H281DRAFT_06018 0.64 -0.5 22,247 + H281DRAFT_06018 0.70 -0.5 22,247 + H281DRAFT_06018 0.70 +0.4 22,247 + H281DRAFT_06018 0.70 -0.9 22,248 - H281DRAFT_06018 0.71 +0.3 22,248 - H281DRAFT_06018 0.71 -1.5 22,250 + H281DRAFT_06018 0.71 +0.4 22,251 - H281DRAFT_06018 0.71 -0.5 22,346 + H281DRAFT_06018 0.79 -0.2 22,346 + H281DRAFT_06018 0.79 -0.0 22,346 + H281DRAFT_06018 0.79 -0.4 22,347 - H281DRAFT_06018 0.79 -0.7 22,347 - H281DRAFT_06018 0.79 -0.4 22,347 - H281DRAFT_06018 0.79 +0.4 22,406 + H281DRAFT_06018 0.85 +0.5 22,406 + H281DRAFT_06018 0.85 -0.4 22,406 + H281DRAFT_06018 0.85 -0.0 22,407 - H281DRAFT_06018 0.85 -0.0 22,407 - H281DRAFT_06018 0.85 +0.9 22,407 - H281DRAFT_06018 0.85 -1.3 22,650 - +0.6 22,654 + -1.3 22,654 + -0.0 22,655 - +0.0 22,655 - +0.3 22,749 + -0.1 22,749 + +0.4 22,750 - +0.2 22,750 - +0.8 22,896 + H281DRAFT_06019 0.19 -0.1 22,896 + H281DRAFT_06019 0.19 +0.6 22,896 + H281DRAFT_06019 0.19 -0.1 22,937 + H281DRAFT_06019 0.23 +0.8 23,049 + H281DRAFT_06019 0.36 -0.5 23,049 + +1.1 23,050 - H281DRAFT_06019 0.36 -0.9 23,249 + H281DRAFT_06019 0.59 +0.2 23,249 + +1.1 23,399 + H281DRAFT_06019 0.76 -1.3 23,400 - H281DRAFT_06019 0.77 -1.4 23,425 + H281DRAFT_06019 0.79 -0.6 23,602 - +0.3 23,668 + -0.7 23,668 + +0.4 23,668 + -0.7 23,669 - +1.7 23,678 + +0.4 23,678 + -1.7 23,678 + +0.2 23,860 + -1.6 23,861 - -2.3 23,906 - H281DRAFT_06020 0.13 -0.2 23,932 - H281DRAFT_06020 0.16 +0.4 24,065 + H281DRAFT_06020 0.32 +0.8 24,065 + H281DRAFT_06020 0.32 -0.7 24,065 + H281DRAFT_06020 0.32 +2.4 24,065 + H281DRAFT_06020 0.32 -0.7 24,066 - H281DRAFT_06020 0.32 +0.4 24,097 + H281DRAFT_06020 0.35 -0.3 24,355 + H281DRAFT_06020 0.65 +0.4 24,392 + H281DRAFT_06020 0.69 +0.6 24,393 - H281DRAFT_06020 0.69 +1.2 24,428 + H281DRAFT_06020 0.73 +2.1
Or see this region's nucleotide sequence