Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05983 and H281DRAFT_05984 are separated by 145 nucleotides H281DRAFT_05984 and H281DRAFT_05985 are separated by 45 nucleotides H281DRAFT_05985 and H281DRAFT_05986 are separated by 463 nucleotides
H281DRAFT_05983: H281DRAFT_05983 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 126,306 to 127,058
_05983
H281DRAFT_05984: H281DRAFT_05984 - conserved hypothetical protein, at 127,204 to 127,506
_05984
H281DRAFT_05985: H281DRAFT_05985 - Predicted integral membrane protein, at 127,552 to 128,256
_05985
H281DRAFT_05986: H281DRAFT_05986 - transcriptional regulator, TetR family, at 128,720 to 129,355
_05986
Position (kb) 127
128
129 Strain fitness (log2 ratio) -1
0
1
2
3 at 126.772 kb on + strand, within H281DRAFT_05983 at 127.011 kb on + strand at 127.012 kb on - strand at 127.204 kb on - strand at 127.265 kb on - strand, within H281DRAFT_05984 at 127.310 kb on - strand, within H281DRAFT_05984 at 127.342 kb on + strand, within H281DRAFT_05984 at 127.549 kb on + strand at 127.550 kb on - strand at 127.553 kb on + strand at 127.553 kb on + strand at 127.793 kb on + strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 127.794 kb on - strand, within H281DRAFT_05985 at 128.027 kb on + strand, within H281DRAFT_05985 at 128.244 kb on + strand at 128.245 kb on - strand at 128.248 kb on + strand at 128.248 kb on + strand at 128.330 kb on + strand at 128.381 kb on + strand at 128.382 kb on - strand at 128.382 kb on - strand at 128.382 kb on - strand at 128.384 kb on + strand at 128.384 kb on + strand at 128.384 kb on + strand at 128.385 kb on - strand at 128.501 kb on + strand at 128.507 kb on + strand at 128.508 kb on - strand at 128.508 kb on - strand at 128.770 kb on - strand at 128.964 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986 at 129.195 kb on + strand, within H281DRAFT_05986
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 126,772 + H281DRAFT_05983 0.62 +0.8 127,011 + +1.6 127,012 - +0.0 127,204 - -0.1 127,265 - H281DRAFT_05984 0.20 +0.5 127,310 - H281DRAFT_05984 0.35 -1.0 127,342 + H281DRAFT_05984 0.46 -0.8 127,549 + +2.6 127,550 - -0.2 127,553 + -1.1 127,553 + +0.8 127,793 + H281DRAFT_05985 0.34 -1.1 127,794 - H281DRAFT_05985 0.34 +0.2 127,794 - H281DRAFT_05985 0.34 -0.5 127,794 - H281DRAFT_05985 0.34 -0.9 128,027 + H281DRAFT_05985 0.67 -0.2 128,244 + +0.5 128,245 - -0.2 128,248 + +0.7 128,248 + +3.6 128,330 + -0.1 128,381 + -0.1 128,382 - -0.9 128,382 - +0.2 128,382 - +0.6 128,384 + +1.0 128,384 + +1.3 128,384 + +0.8 128,385 - +0.1 128,501 + +0.3 128,507 + -0.2 128,508 - -0.2 128,508 - -0.8 128,770 - -0.9 128,964 + H281DRAFT_05986 0.38 -0.2 129,195 + H281DRAFT_05986 0.75 +1.0 129,195 + H281DRAFT_05986 0.75 +1.2 129,195 + H281DRAFT_05986 0.75 +0.6
Or see this region's nucleotide sequence