Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05946 and H281DRAFT_05947 overlap by 4 nucleotides H281DRAFT_05947 and H281DRAFT_05948 overlap by 4 nucleotides H281DRAFT_05948 and H281DRAFT_05949 are separated by 29 nucleotides
H281DRAFT_05946: H281DRAFT_05946 - monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-), at 85,846 to 87,330
_05946
H281DRAFT_05947: H281DRAFT_05947 - monosaccharide ABC transporter membrane protein, CUT2 family, at 87,327 to 88,262
_05947
H281DRAFT_05948: H281DRAFT_05948 - monosaccharide ABC transporter membrane protein, CUT2 family, at 88,259 to 89,230
_05948
H281DRAFT_05949: H281DRAFT_05949 - gluconolactonase, at 89,260 to 90,168
_05949
Position (kb) 87
88
89 Strain fitness (log2 ratio) -1
0
1 at 86.481 kb on + strand, within H281DRAFT_05946 at 86.482 kb on - strand at 86.673 kb on - strand, within H281DRAFT_05946 at 86.782 kb on + strand, within H281DRAFT_05946 at 86.783 kb on - strand, within H281DRAFT_05946 at 86.783 kb on - strand at 87.142 kb on + strand, within H281DRAFT_05946 at 87.142 kb on + strand, within H281DRAFT_05946 at 87.143 kb on - strand, within H281DRAFT_05946 at 87.143 kb on - strand, within H281DRAFT_05946 at 87.233 kb on - strand at 87.402 kb on - strand at 87.432 kb on + strand, within H281DRAFT_05947 at 87.432 kb on + strand, within H281DRAFT_05947 at 87.630 kb on + strand, within H281DRAFT_05947 at 87.630 kb on + strand, within H281DRAFT_05947 at 87.780 kb on + strand, within H281DRAFT_05947 at 88.039 kb on - strand, within H281DRAFT_05947 at 88.229 kb on - strand at 88.779 kb on - strand, within H281DRAFT_05948 at 89.172 kb on + strand at 89.173 kb on - strand at 89.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 86,481 + H281DRAFT_05946 0.43 +1.4 86,482 - +0.8 86,673 - H281DRAFT_05946 0.56 -1.3 86,782 + H281DRAFT_05946 0.63 +0.9 86,783 - H281DRAFT_05946 0.63 +0.9 86,783 - +0.8 87,142 + H281DRAFT_05946 0.87 -0.4 87,142 + H281DRAFT_05946 0.87 -0.6 87,143 - H281DRAFT_05946 0.87 +0.8 87,143 - H281DRAFT_05946 0.87 +1.1 87,233 - -0.4 87,402 - +1.4 87,432 + H281DRAFT_05947 0.11 +0.4 87,432 + H281DRAFT_05947 0.11 +1.1 87,630 + H281DRAFT_05947 0.32 -0.2 87,630 + H281DRAFT_05947 0.32 -1.3 87,780 + H281DRAFT_05947 0.48 +1.7 88,039 - H281DRAFT_05947 0.76 +1.0 88,229 - +0.1 88,779 - H281DRAFT_05948 0.53 -1.2 89,172 + -0.5 89,173 - +1.1 89,175 - +0.5
Or see this region's nucleotide sequence