Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05832 and H281DRAFT_05833 are separated by 216 nucleotides H281DRAFT_05833 and H281DRAFT_05834 are separated by 78 nucleotides H281DRAFT_05834 and H281DRAFT_05835 are separated by 133 nucleotides
H281DRAFT_05832: H281DRAFT_05832 - hypothetical protein, at 108,810 to 109,022
_05832
H281DRAFT_05833: H281DRAFT_05833 - hypothetical protein, at 109,239 to 109,517
_05833
H281DRAFT_05834: H281DRAFT_05834 - hypothetical protein, at 109,596 to 110,402
_05834
H281DRAFT_05835: H281DRAFT_05835 - 3-hydroxyisobutyrate dehydrogenase, at 110,536 to 111,405
_05835
Position (kb)
109
110
111 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 108.663 kb on + strand at 108.663 kb on + strand at 108.663 kb on + strand at 108.664 kb on - strand at 108.667 kb on + strand at 108.667 kb on + strand at 108.667 kb on + strand at 108.668 kb on - strand at 108.668 kb on - strand at 108.668 kb on - strand at 108.695 kb on + strand at 108.696 kb on - strand at 108.705 kb on - strand at 108.705 kb on - strand at 108.705 kb on - strand at 108.707 kb on + strand at 108.707 kb on + strand at 108.708 kb on - strand at 108.708 kb on - strand at 108.765 kb on - strand at 108.765 kb on - strand at 109.020 kb on + strand at 109.021 kb on - strand at 109.021 kb on - strand at 109.021 kb on - strand at 109.021 kb on - strand at 109.210 kb on - strand at 109.517 kb on + strand at 109.517 kb on + strand at 109.517 kb on + strand at 109.538 kb on - strand at 109.538 kb on - strand at 109.538 kb on - strand at 109.541 kb on + strand at 109.541 kb on + strand at 109.541 kb on + strand at 109.541 kb on + strand at 109.541 kb on + strand at 109.541 kb on + strand at 109.542 kb on - strand at 109.542 kb on - strand at 109.542 kb on - strand at 109.555 kb on - strand at 109.555 kb on - strand at 109.555 kb on - strand at 109.845 kb on + strand, within H281DRAFT_05834 at 109.845 kb on + strand, within H281DRAFT_05834 at 109.846 kb on - strand, within H281DRAFT_05834 at 109.930 kb on + strand, within H281DRAFT_05834 at 109.930 kb on + strand, within H281DRAFT_05834 at 109.931 kb on - strand, within H281DRAFT_05834 at 110.033 kb on - strand, within H281DRAFT_05834 at 110.044 kb on + strand, within H281DRAFT_05834 at 110.044 kb on + strand, within H281DRAFT_05834 at 110.051 kb on + strand, within H281DRAFT_05834 at 110.250 kb on + strand, within H281DRAFT_05834 at 110.250 kb on + strand, within H281DRAFT_05834 at 110.412 kb on - strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.484 kb on + strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.485 kb on - strand at 110.504 kb on + strand at 110.505 kb on - strand at 110.518 kb on + strand at 110.519 kb on - strand at 110.519 kb on - strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.612 kb on + strand at 110.613 kb on - strand at 110.613 kb on - strand at 110.618 kb on + strand at 110.618 kb on + strand at 110.618 kb on + strand at 110.619 kb on - strand at 110.619 kb on - strand at 110.619 kb on - strand at 110.869 kb on + strand, within H281DRAFT_05835 at 110.870 kb on - strand, within H281DRAFT_05835 at 111.181 kb on + strand, within H281DRAFT_05835 at 111.181 kb on + strand, within H281DRAFT_05835 at 111.209 kb on - strand, within H281DRAFT_05835
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 108,663 + +0.4 108,663 + -3.5 108,663 + +0.3 108,664 - +0.3 108,667 + -0.7 108,667 + -0.8 108,667 + -1.1 108,668 - +0.2 108,668 - -0.1 108,668 - -0.2 108,695 + +0.6 108,696 - -0.1 108,705 - +0.9 108,705 - -0.6 108,705 - -0.0 108,707 + +0.6 108,707 + +0.3 108,708 - +1.1 108,708 - -0.6 108,765 - +0.5 108,765 - +0.6 109,020 + -0.1 109,021 - +0.2 109,021 - -0.9 109,021 - -0.3 109,021 - -0.5 109,210 - +0.2 109,517 + +0.3 109,517 + +0.3 109,517 + +0.5 109,538 - +1.4 109,538 - +0.8 109,538 - -0.5 109,541 + -0.1 109,541 + +0.1 109,541 + +0.1 109,541 + -0.3 109,541 + -0.8 109,541 + -0.9 109,542 - +0.8 109,542 - -0.5 109,542 - -0.6 109,555 - -0.2 109,555 - +0.1 109,555 - +0.8 109,845 + H281DRAFT_05834 0.31 -0.3 109,845 + H281DRAFT_05834 0.31 -0.9 109,846 - H281DRAFT_05834 0.31 -0.7 109,930 + H281DRAFT_05834 0.41 +0.5 109,930 + H281DRAFT_05834 0.41 -0.0 109,931 - H281DRAFT_05834 0.42 -1.0 110,033 - H281DRAFT_05834 0.54 -0.1 110,044 + H281DRAFT_05834 0.56 -0.7 110,044 + H281DRAFT_05834 0.56 -0.5 110,051 + H281DRAFT_05834 0.56 -0.4 110,250 + H281DRAFT_05834 0.81 -0.1 110,250 + H281DRAFT_05834 0.81 +0.8 110,412 - +0.5 110,484 + -0.4 110,484 + -1.9 110,484 + -0.4 110,484 + +0.8 110,484 + +0.2 110,484 + +0.6 110,484 + +0.1 110,484 + +0.2 110,484 + +2.1 110,484 + -2.2 110,484 + -0.3 110,485 - -0.7 110,485 - +0.0 110,485 - -0.2 110,485 - -1.0 110,485 - +1.1 110,485 - +0.2 110,485 - +0.1 110,485 - -0.4 110,485 - +0.4 110,485 - -0.9 110,485 - +0.3 110,485 - +0.3 110,485 - -0.3 110,485 - -0.6 110,504 + +0.4 110,505 - +0.1 110,518 + +0.9 110,519 - -0.5 110,519 - +0.1 110,612 + -0.3 110,612 + +0.0 110,612 + -0.2 110,612 + -0.7 110,612 + +2.1 110,613 - +0.8 110,613 - -2.4 110,618 + -0.6 110,618 + +0.3 110,618 + +0.5 110,619 - +0.2 110,619 - -1.5 110,619 - -0.2 110,869 + H281DRAFT_05835 0.38 +1.7 110,870 - H281DRAFT_05835 0.38 +0.4 111,181 + H281DRAFT_05835 0.74 +0.1 111,181 + H281DRAFT_05835 0.74 +0.0 111,209 - H281DRAFT_05835 0.77 +0.2
Or see this region's nucleotide sequence