Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05802 and H281DRAFT_05803 are separated by 150 nucleotides H281DRAFT_05803 and H281DRAFT_05804 are separated by 6 nucleotides H281DRAFT_05804 and H281DRAFT_05805 are separated by 0 nucleotides
H281DRAFT_05802: H281DRAFT_05802 - dipeptide transport system substrate-binding protein, at 77,334 to 78,962
_05802
H281DRAFT_05803: H281DRAFT_05803 - dipeptide transport system permease protein, at 79,113 to 80,123
_05803
H281DRAFT_05804: H281DRAFT_05804 - dipeptide transport system permease protein, at 80,130 to 81,047
_05804
H281DRAFT_05805: H281DRAFT_05805 - dipeptide transport system ATP-binding protein, at 81,048 to 82,052
_05805
Position (kb) 79
80
81 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 78.157 kb on - strand, within H281DRAFT_05802 at 78.157 kb on - strand, within H281DRAFT_05802 at 78.238 kb on - strand, within H281DRAFT_05802 at 78.246 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.336 kb on + strand, within H281DRAFT_05802 at 78.390 kb on + strand, within H281DRAFT_05802 at 78.390 kb on + strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.391 kb on - strand, within H281DRAFT_05802 at 78.418 kb on - strand, within H281DRAFT_05802 at 78.429 kb on - strand, within H281DRAFT_05802 at 78.510 kb on + strand, within H281DRAFT_05802 at 78.510 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.591 kb on + strand, within H281DRAFT_05802 at 78.592 kb on - strand, within H281DRAFT_05802 at 78.592 kb on - strand, within H281DRAFT_05802 at 78.607 kb on - strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.744 kb on + strand, within H281DRAFT_05802 at 78.745 kb on - strand, within H281DRAFT_05802 at 78.814 kb on - strand at 78.814 kb on - strand at 78.879 kb on + strand at 78.961 kb on - strand at 79.005 kb on + strand at 79.005 kb on + strand at 79.006 kb on - strand at 79.308 kb on + strand, within H281DRAFT_05803 at 79.308 kb on + strand, within H281DRAFT_05803 at 79.309 kb on - strand, within H281DRAFT_05803 at 79.309 kb on - strand, within H281DRAFT_05803 at 79.629 kb on + strand, within H281DRAFT_05803 at 79.629 kb on + strand, within H281DRAFT_05803 at 79.630 kb on - strand, within H281DRAFT_05803 at 79.809 kb on + strand, within H281DRAFT_05803 at 79.809 kb on + strand, within H281DRAFT_05803 at 79.810 kb on - strand, within H281DRAFT_05803 at 79.810 kb on - strand, within H281DRAFT_05803 at 79.939 kb on + strand, within H281DRAFT_05803 at 80.115 kb on - strand at 80.265 kb on - strand, within H281DRAFT_05804 at 80.531 kb on + strand, within H281DRAFT_05804 at 80.665 kb on - strand, within H281DRAFT_05804 at 80.712 kb on + strand, within H281DRAFT_05804 at 80.712 kb on + strand, within H281DRAFT_05804 at 80.713 kb on - strand, within H281DRAFT_05804 at 80.713 kb on - strand, within H281DRAFT_05804 at 81.058 kb on + strand at 81.059 kb on - strand at 81.059 kb on - strand at 81.098 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 78,157 - H281DRAFT_05802 0.51 -1.5 78,157 - H281DRAFT_05802 0.51 -0.8 78,238 - H281DRAFT_05802 0.55 -1.3 78,246 + H281DRAFT_05802 0.56 -2.6 78,336 + H281DRAFT_05802 0.62 -0.0 78,336 + H281DRAFT_05802 0.62 -0.6 78,336 + H281DRAFT_05802 0.62 -1.4 78,390 + H281DRAFT_05802 0.65 -1.0 78,390 + H281DRAFT_05802 0.65 -1.6 78,391 - H281DRAFT_05802 0.65 -1.1 78,391 - H281DRAFT_05802 0.65 -3.2 78,391 - H281DRAFT_05802 0.65 -0.3 78,418 - H281DRAFT_05802 0.67 -1.9 78,429 - H281DRAFT_05802 0.67 -2.2 78,510 + H281DRAFT_05802 0.72 -1.0 78,510 + H281DRAFT_05802 0.72 -3.9 78,591 + H281DRAFT_05802 0.77 +0.0 78,591 + H281DRAFT_05802 0.77 -0.5 78,591 + H281DRAFT_05802 0.77 -1.1 78,592 - H281DRAFT_05802 0.77 -2.0 78,592 - H281DRAFT_05802 0.77 -0.0 78,607 - H281DRAFT_05802 0.78 -1.9 78,744 + H281DRAFT_05802 0.87 -0.5 78,744 + H281DRAFT_05802 0.87 -1.4 78,744 + H281DRAFT_05802 0.87 -1.4 78,744 + H281DRAFT_05802 0.87 -1.6 78,744 + H281DRAFT_05802 0.87 -0.9 78,744 + H281DRAFT_05802 0.87 -1.2 78,744 + H281DRAFT_05802 0.87 -1.7 78,744 + H281DRAFT_05802 0.87 -1.6 78,745 - H281DRAFT_05802 0.87 -1.1 78,814 - -1.5 78,814 - -2.5 78,879 + +0.7 78,961 - +1.1 79,005 + +0.4 79,005 + -0.3 79,006 - +0.1 79,308 + H281DRAFT_05803 0.19 -1.4 79,308 + H281DRAFT_05803 0.19 -1.8 79,309 - H281DRAFT_05803 0.19 +0.2 79,309 - H281DRAFT_05803 0.19 -0.9 79,629 + H281DRAFT_05803 0.51 -0.2 79,629 + H281DRAFT_05803 0.51 -1.3 79,630 - H281DRAFT_05803 0.51 +0.1 79,809 + H281DRAFT_05803 0.69 -2.9 79,809 + H281DRAFT_05803 0.69 -0.5 79,810 - H281DRAFT_05803 0.69 -0.9 79,810 - H281DRAFT_05803 0.69 +0.2 79,939 + H281DRAFT_05803 0.82 -1.4 80,115 - -0.4 80,265 - H281DRAFT_05804 0.15 +0.2 80,531 + H281DRAFT_05804 0.44 -0.4 80,665 - H281DRAFT_05804 0.58 -1.2 80,712 + H281DRAFT_05804 0.63 +0.2 80,712 + H281DRAFT_05804 0.63 -2.3 80,713 - H281DRAFT_05804 0.64 -1.6 80,713 - H281DRAFT_05804 0.64 -1.7 81,058 + -0.1 81,059 - -1.6 81,059 - -1.4 81,098 - -0.6
Or see this region's nucleotide sequence