Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05787 and H281DRAFT_05788 are separated by 239 nucleotides H281DRAFT_05788 and H281DRAFT_05789 overlap by 4 nucleotides H281DRAFT_05789 and H281DRAFT_05790 are separated by 67 nucleotides
H281DRAFT_05787: H281DRAFT_05787 - flagellar hook-basal body complex protein FliE, at 61,228 to 61,578
_05787
H281DRAFT_05788: H281DRAFT_05788 - flagellar protein FliS, at 61,818 to 62,252
_05788
H281DRAFT_05789: H281DRAFT_05789 - flagellar protein FliT, at 62,249 to 62,575
_05789
H281DRAFT_05790: H281DRAFT_05790 - hook-length control protein FliK, at 62,643 to 64,112
_05790
Position (kb) 62
63 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 61.550 kb on - strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.737 kb on + strand at 61.738 kb on - strand at 61.738 kb on - strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.793 kb on + strand at 61.794 kb on - strand at 61.851 kb on + strand at 61.852 kb on - strand at 61.917 kb on + strand, within H281DRAFT_05788 at 61.917 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.086 kb on + strand, within H281DRAFT_05788 at 62.087 kb on - strand, within H281DRAFT_05788 at 62.087 kb on - strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.088 kb on + strand, within H281DRAFT_05788 at 62.089 kb on - strand, within H281DRAFT_05788 at 62.090 kb on + strand at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.090 kb on + strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.091 kb on - strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.094 kb on + strand, within H281DRAFT_05788 at 62.095 kb on - strand, within H281DRAFT_05788 at 62.095 kb on - strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.096 kb on + strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.097 kb on - strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.125 kb on + strand, within H281DRAFT_05788 at 62.126 kb on - strand, within H281DRAFT_05788 at 62.209 kb on + strand at 62.209 kb on + strand at 62.267 kb on + strand at 62.268 kb on - strand at 62.280 kb on - strand at 62.367 kb on - strand, within H281DRAFT_05789 at 62.561 kb on + strand at 62.561 kb on + strand at 62.896 kb on + strand, within H281DRAFT_05790 at 62.897 kb on - strand, within H281DRAFT_05790 at 62.985 kb on - strand, within H281DRAFT_05790 at 63.090 kb on + strand, within H281DRAFT_05790 at 63.091 kb on - strand, within H281DRAFT_05790 at 63.410 kb on - strand, within H281DRAFT_05790
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 61,550 - +1.7 61,737 + -0.1 61,737 + +0.1 61,737 + +3.1 61,737 + -0.8 61,737 + +0.1 61,737 + +0.6 61,738 - +0.7 61,738 - +1.5 61,793 + +0.2 61,793 + +0.8 61,793 + +0.7 61,793 + -0.4 61,793 + -0.2 61,793 + -1.4 61,794 - +0.0 61,851 + +0.7 61,852 - +0.9 61,917 + H281DRAFT_05788 0.23 -0.7 61,917 + H281DRAFT_05788 0.23 -0.6 62,086 + H281DRAFT_05788 0.62 +0.9 62,086 + H281DRAFT_05788 0.62 -1.8 62,086 + H281DRAFT_05788 0.62 -0.4 62,087 - H281DRAFT_05788 0.62 -0.7 62,087 - H281DRAFT_05788 0.62 +0.2 62,088 + H281DRAFT_05788 0.62 -2.1 62,088 + H281DRAFT_05788 0.62 +0.5 62,088 + H281DRAFT_05788 0.62 +1.3 62,089 - H281DRAFT_05788 0.62 -0.2 62,090 + +3.0 62,090 + H281DRAFT_05788 0.63 -0.0 62,090 + H281DRAFT_05788 0.63 +1.0 62,090 + H281DRAFT_05788 0.63 +0.7 62,090 + H281DRAFT_05788 0.63 +0.6 62,090 + H281DRAFT_05788 0.63 +0.2 62,090 + H281DRAFT_05788 0.63 +0.3 62,090 + H281DRAFT_05788 0.63 +0.2 62,090 + H281DRAFT_05788 0.63 +1.9 62,090 + H281DRAFT_05788 0.63 -2.2 62,090 + H281DRAFT_05788 0.63 -0.0 62,091 - H281DRAFT_05788 0.63 +0.8 62,091 - H281DRAFT_05788 0.63 +0.4 62,091 - H281DRAFT_05788 0.63 -0.6 62,091 - H281DRAFT_05788 0.63 +0.7 62,091 - H281DRAFT_05788 0.63 +0.5 62,091 - H281DRAFT_05788 0.63 +0.6 62,091 - H281DRAFT_05788 0.63 +0.1 62,091 - H281DRAFT_05788 0.63 +0.6 62,091 - H281DRAFT_05788 0.63 +0.9 62,091 - H281DRAFT_05788 0.63 +1.6 62,094 + H281DRAFT_05788 0.63 -0.3 62,094 + H281DRAFT_05788 0.63 +0.6 62,094 + H281DRAFT_05788 0.63 +0.3 62,094 + H281DRAFT_05788 0.63 +0.2 62,094 + H281DRAFT_05788 0.63 +0.6 62,094 + H281DRAFT_05788 0.63 +0.1 62,095 - H281DRAFT_05788 0.64 +0.4 62,095 - H281DRAFT_05788 0.64 +0.8 62,096 + H281DRAFT_05788 0.64 +0.3 62,096 + H281DRAFT_05788 0.64 +1.9 62,096 + H281DRAFT_05788 0.64 -1.3 62,096 + H281DRAFT_05788 0.64 +0.0 62,096 + H281DRAFT_05788 0.64 -0.3 62,097 - H281DRAFT_05788 0.64 +0.1 62,097 - H281DRAFT_05788 0.64 +2.1 62,097 - H281DRAFT_05788 0.64 -0.1 62,097 - H281DRAFT_05788 0.64 +0.2 62,125 + H281DRAFT_05788 0.71 -0.4 62,125 + H281DRAFT_05788 0.71 +0.5 62,125 + H281DRAFT_05788 0.71 +0.7 62,125 + H281DRAFT_05788 0.71 +1.0 62,126 - H281DRAFT_05788 0.71 +1.0 62,209 + +0.5 62,209 + +1.3 62,267 + +0.0 62,268 - +0.2 62,280 - +0.6 62,367 - H281DRAFT_05789 0.36 -1.4 62,561 + +0.1 62,561 + +2.2 62,896 + H281DRAFT_05790 0.17 -0.4 62,897 - H281DRAFT_05790 0.17 -0.5 62,985 - H281DRAFT_05790 0.23 -0.8 63,090 + H281DRAFT_05790 0.30 -0.8 63,091 - H281DRAFT_05790 0.30 +1.2 63,410 - H281DRAFT_05790 0.52 -1.6
Or see this region's nucleotide sequence