Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05392 and H281DRAFT_05393 are separated by 474 nucleotides H281DRAFT_05393 and H281DRAFT_05394 are separated by 119 nucleotides H281DRAFT_05394 and H281DRAFT_05395 are separated by 300 nucleotides
H281DRAFT_05392: H281DRAFT_05392 - hypothetical protein, at 154,590 to 155,699
_05392
H281DRAFT_05393: H281DRAFT_05393 - Outer membrane protein (porin), at 156,174 to 157,334
_05393
H281DRAFT_05394: H281DRAFT_05394 - hypothetical protein, at 157,454 to 157,753
_05394
H281DRAFT_05395: H281DRAFT_05395 - Protein of unknown function (DUF3465), at 158,054 to 158,470
_05395
Position (kb) 156
157
158 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 155.261 kb on - strand, within H281DRAFT_05392 at 155.261 kb on - strand, within H281DRAFT_05392 at 155.284 kb on + strand, within H281DRAFT_05392 at 155.285 kb on - strand, within H281DRAFT_05392 at 155.581 kb on + strand, within H281DRAFT_05392 at 155.582 kb on - strand at 155.706 kb on + strand at 155.707 kb on - strand at 155.853 kb on + strand at 155.912 kb on - strand at 155.912 kb on - strand at 155.985 kb on + strand at 156.027 kb on - strand at 156.058 kb on - strand at 156.097 kb on - strand at 156.097 kb on - strand at 156.112 kb on + strand at 156.113 kb on - strand at 156.113 kb on - strand at 156.265 kb on - strand at 156.265 kb on - strand at 156.322 kb on - strand, within H281DRAFT_05393 at 156.461 kb on + strand, within H281DRAFT_05393 at 156.461 kb on + strand, within H281DRAFT_05393 at 156.461 kb on + strand, within H281DRAFT_05393 at 156.462 kb on - strand, within H281DRAFT_05393 at 156.462 kb on - strand, within H281DRAFT_05393 at 156.462 kb on - strand, within H281DRAFT_05393 at 156.462 kb on - strand, within H281DRAFT_05393 at 156.549 kb on + strand, within H281DRAFT_05393 at 156.550 kb on - strand, within H281DRAFT_05393 at 156.607 kb on - strand, within H281DRAFT_05393 at 156.658 kb on - strand, within H281DRAFT_05393 at 156.658 kb on - strand, within H281DRAFT_05393 at 156.699 kb on + strand at 156.699 kb on + strand, within H281DRAFT_05393 at 156.700 kb on - strand, within H281DRAFT_05393 at 156.741 kb on + strand, within H281DRAFT_05393 at 156.742 kb on - strand, within H281DRAFT_05393 at 156.743 kb on + strand, within H281DRAFT_05393 at 156.743 kb on + strand, within H281DRAFT_05393 at 156.759 kb on + strand, within H281DRAFT_05393 at 156.759 kb on + strand, within H281DRAFT_05393 at 156.759 kb on + strand, within H281DRAFT_05393 at 156.760 kb on - strand, within H281DRAFT_05393 at 156.766 kb on - strand, within H281DRAFT_05393 at 156.793 kb on - strand, within H281DRAFT_05393 at 156.797 kb on - strand, within H281DRAFT_05393 at 156.807 kb on - strand, within H281DRAFT_05393 at 156.878 kb on - strand, within H281DRAFT_05393 at 156.893 kb on + strand, within H281DRAFT_05393 at 156.894 kb on - strand, within H281DRAFT_05393 at 156.894 kb on - strand, within H281DRAFT_05393 at 156.894 kb on - strand, within H281DRAFT_05393 at 156.899 kb on + strand, within H281DRAFT_05393 at 156.899 kb on + strand, within H281DRAFT_05393 at 156.946 kb on - strand, within H281DRAFT_05393 at 156.970 kb on - strand, within H281DRAFT_05393 at 157.023 kb on + strand, within H281DRAFT_05393 at 157.086 kb on + strand, within H281DRAFT_05393 at 157.086 kb on + strand, within H281DRAFT_05393 at 157.087 kb on - strand, within H281DRAFT_05393 at 157.087 kb on - strand, within H281DRAFT_05393 at 157.087 kb on - strand, within H281DRAFT_05393 at 157.094 kb on + strand, within H281DRAFT_05393 at 157.095 kb on - strand, within H281DRAFT_05393 at 157.095 kb on - strand, within H281DRAFT_05393 at 157.095 kb on - strand, within H281DRAFT_05393 at 157.107 kb on + strand, within H281DRAFT_05393 at 157.168 kb on - strand, within H281DRAFT_05393 at 157.168 kb on - strand, within H281DRAFT_05393 at 157.194 kb on + strand, within H281DRAFT_05393 at 157.194 kb on + strand, within H281DRAFT_05393 at 157.195 kb on - strand, within H281DRAFT_05393 at 157.195 kb on - strand, within H281DRAFT_05393 at 157.259 kb on + strand at 157.260 kb on - strand at 157.287 kb on - strand at 157.332 kb on + strand at 157.370 kb on - strand at 157.590 kb on + strand, within H281DRAFT_05394 at 157.591 kb on - strand, within H281DRAFT_05394 at 157.771 kb on + strand at 157.771 kb on + strand at 157.771 kb on + strand at 157.772 kb on - strand at 157.772 kb on - strand at 157.772 kb on - strand at 157.848 kb on + strand at 157.908 kb on + strand at 157.909 kb on - strand at 157.909 kb on - strand at 157.909 kb on - strand at 157.923 kb on + strand at 157.938 kb on - strand at 157.974 kb on - strand at 158.093 kb on + strand at 158.094 kb on - strand at 158.148 kb on + strand, within H281DRAFT_05395 at 158.148 kb on + strand, within H281DRAFT_05395 at 158.148 kb on + strand, within H281DRAFT_05395 at 158.191 kb on + strand, within H281DRAFT_05395 at 158.191 kb on + strand, within H281DRAFT_05395 at 158.192 kb on - strand, within H281DRAFT_05395 at 158.192 kb on - strand, within H281DRAFT_05395
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 155,261 - H281DRAFT_05392 0.60 -0.9 155,261 - H281DRAFT_05392 0.60 -0.7 155,284 + H281DRAFT_05392 0.63 -1.2 155,285 - H281DRAFT_05392 0.63 -0.3 155,581 + H281DRAFT_05392 0.89 -2.2 155,582 - -0.2 155,706 + +0.1 155,707 - +1.0 155,853 + +0.8 155,912 - +0.2 155,912 - +0.8 155,985 + +3.8 156,027 - -0.8 156,058 - +0.3 156,097 - +0.5 156,097 - -0.2 156,112 + +0.6 156,113 - -0.3 156,113 - -0.3 156,265 - -0.1 156,265 - -0.9 156,322 - H281DRAFT_05393 0.13 +0.5 156,461 + H281DRAFT_05393 0.25 +0.2 156,461 + H281DRAFT_05393 0.25 -0.0 156,461 + H281DRAFT_05393 0.25 -0.1 156,462 - H281DRAFT_05393 0.25 +0.3 156,462 - H281DRAFT_05393 0.25 -0.4 156,462 - H281DRAFT_05393 0.25 +0.0 156,462 - H281DRAFT_05393 0.25 +1.3 156,549 + H281DRAFT_05393 0.32 -0.7 156,550 - H281DRAFT_05393 0.32 -0.3 156,607 - H281DRAFT_05393 0.37 +0.5 156,658 - H281DRAFT_05393 0.42 -0.1 156,658 - H281DRAFT_05393 0.42 -1.1 156,699 + -1.0 156,699 + H281DRAFT_05393 0.45 +0.8 156,700 - H281DRAFT_05393 0.45 -2.6 156,741 + H281DRAFT_05393 0.49 +0.2 156,742 - H281DRAFT_05393 0.49 +1.1 156,743 + H281DRAFT_05393 0.49 +2.5 156,743 + H281DRAFT_05393 0.49 -0.5 156,759 + H281DRAFT_05393 0.50 +0.6 156,759 + H281DRAFT_05393 0.50 -0.2 156,759 + H281DRAFT_05393 0.50 +0.5 156,760 - H281DRAFT_05393 0.50 +0.1 156,766 - H281DRAFT_05393 0.51 -0.2 156,793 - H281DRAFT_05393 0.53 +0.2 156,797 - H281DRAFT_05393 0.54 -0.3 156,807 - H281DRAFT_05393 0.55 -1.0 156,878 - H281DRAFT_05393 0.61 +0.6 156,893 + H281DRAFT_05393 0.62 +0.7 156,894 - H281DRAFT_05393 0.62 -0.3 156,894 - H281DRAFT_05393 0.62 -0.5 156,894 - H281DRAFT_05393 0.62 -0.9 156,899 + H281DRAFT_05393 0.62 -1.3 156,899 + H281DRAFT_05393 0.62 -1.3 156,946 - H281DRAFT_05393 0.66 -0.0 156,970 - H281DRAFT_05393 0.69 +0.2 157,023 + H281DRAFT_05393 0.73 -0.3 157,086 + H281DRAFT_05393 0.79 -1.0 157,086 + H281DRAFT_05393 0.79 -0.1 157,087 - H281DRAFT_05393 0.79 +0.0 157,087 - H281DRAFT_05393 0.79 +0.7 157,087 - H281DRAFT_05393 0.79 +0.0 157,094 + H281DRAFT_05393 0.79 -0.9 157,095 - H281DRAFT_05393 0.79 -0.1 157,095 - H281DRAFT_05393 0.79 -0.3 157,095 - H281DRAFT_05393 0.79 +0.0 157,107 + H281DRAFT_05393 0.80 -0.1 157,168 - H281DRAFT_05393 0.86 -1.8 157,168 - H281DRAFT_05393 0.86 -0.0 157,194 + H281DRAFT_05393 0.88 +0.8 157,194 + H281DRAFT_05393 0.88 -0.2 157,195 - H281DRAFT_05393 0.88 -0.3 157,195 - H281DRAFT_05393 0.88 -0.3 157,259 + +0.0 157,260 - -0.5 157,287 - +0.2 157,332 + +0.6 157,370 - +0.0 157,590 + H281DRAFT_05394 0.45 -0.3 157,591 - H281DRAFT_05394 0.46 +0.3 157,771 + -0.6 157,771 + -0.5 157,771 + +1.5 157,772 - -0.4 157,772 - -0.5 157,772 - +0.1 157,848 + -0.2 157,908 + +0.5 157,909 - +0.2 157,909 - -0.1 157,909 - -1.2 157,923 + +0.1 157,938 - -0.9 157,974 - +0.4 158,093 + +0.6 158,094 - +0.8 158,148 + H281DRAFT_05395 0.23 +0.8 158,148 + H281DRAFT_05395 0.23 -0.2 158,148 + H281DRAFT_05395 0.23 -0.1 158,191 + H281DRAFT_05395 0.33 -1.4 158,191 + H281DRAFT_05395 0.33 +0.0 158,192 - H281DRAFT_05395 0.33 +1.0 158,192 - H281DRAFT_05395 0.33 +0.3
Or see this region's nucleotide sequence