Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05362 and H281DRAFT_05363 are separated by 36 nucleotides H281DRAFT_05363 and H281DRAFT_05364 are separated by 14 nucleotides H281DRAFT_05364 and H281DRAFT_05365 are separated by 72 nucleotides H281DRAFT_05365 and H281DRAFT_05366 are separated by 83 nucleotides
H281DRAFT_05362: H281DRAFT_05362 - Tetratricopeptide repeat-containing protein, at 115,643 to 116,329
_05362
H281DRAFT_05363: H281DRAFT_05363 - type VI secretion system protein ImpB, at 116,366 to 116,914
_05363
H281DRAFT_05364: H281DRAFT_05364 - type VI secretion system protein ImpC, at 116,929 to 118,419
_05364
H281DRAFT_05365: H281DRAFT_05365 - type VI secretion system secreted protein Hcp, at 118,492 to 118,995
_05365
H281DRAFT_05366: H281DRAFT_05366 - type VI secretion system protein ImpF, at 119,079 to 119,558
_05366
Position (kb) 116
117
118
119 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 115.969 kb on - strand, within H281DRAFT_05362 at 115.969 kb on - strand, within H281DRAFT_05362 at 116.184 kb on + strand, within H281DRAFT_05362 at 116.185 kb on - strand, within H281DRAFT_05362 at 116.385 kb on + strand at 116.385 kb on + strand at 116.385 kb on + strand at 116.386 kb on - strand at 116.432 kb on + strand, within H281DRAFT_05363 at 116.432 kb on + strand, within H281DRAFT_05363 at 116.432 kb on + strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.433 kb on - strand, within H281DRAFT_05363 at 116.912 kb on + strand at 116.912 kb on + strand at 116.913 kb on - strand at 116.916 kb on + strand at 116.917 kb on - strand at 116.917 kb on - strand at 116.917 kb on - strand at 117.236 kb on - strand, within H281DRAFT_05364 at 117.236 kb on - strand, within H281DRAFT_05364 at 117.364 kb on + strand, within H281DRAFT_05364 at 117.365 kb on - strand, within H281DRAFT_05364 at 117.365 kb on - strand, within H281DRAFT_05364 at 117.451 kb on + strand, within H281DRAFT_05364 at 117.452 kb on - strand, within H281DRAFT_05364 at 117.452 kb on - strand, within H281DRAFT_05364 at 117.637 kb on + strand, within H281DRAFT_05364 at 117.638 kb on - strand, within H281DRAFT_05364 at 117.747 kb on + strand, within H281DRAFT_05364 at 117.747 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.754 kb on + strand, within H281DRAFT_05364 at 117.937 kb on - strand, within H281DRAFT_05364 at 118.006 kb on + strand, within H281DRAFT_05364 at 118.051 kb on + strand, within H281DRAFT_05364 at 118.102 kb on + strand, within H281DRAFT_05364 at 118.102 kb on + strand, within H281DRAFT_05364 at 118.220 kb on - strand, within H281DRAFT_05364 at 118.418 kb on - strand at 118.691 kb on + strand, within H281DRAFT_05365 at 118.709 kb on - strand, within H281DRAFT_05365 at 118.709 kb on - strand, within H281DRAFT_05365 at 118.802 kb on + strand, within H281DRAFT_05365 at 118.803 kb on - strand, within H281DRAFT_05365 at 118.813 kb on + strand, within H281DRAFT_05365 at 118.813 kb on + strand, within H281DRAFT_05365 at 118.885 kb on + strand, within H281DRAFT_05365 at 118.885 kb on + strand, within H281DRAFT_05365 at 118.886 kb on - strand, within H281DRAFT_05365 at 118.886 kb on - strand, within H281DRAFT_05365 at 118.984 kb on + strand at 118.985 kb on - strand at 118.985 kb on - strand at 119.058 kb on + strand at 119.059 kb on - strand at 119.283 kb on + strand, within H281DRAFT_05366 at 119.283 kb on + strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.284 kb on - strand, within H281DRAFT_05366 at 119.326 kb on - strand, within H281DRAFT_05366 at 119.386 kb on + strand, within H281DRAFT_05366 at 119.387 kb on - strand, within H281DRAFT_05366
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 115,969 - H281DRAFT_05362 0.47 -0.3 115,969 - H281DRAFT_05362 0.47 +0.4 116,184 + H281DRAFT_05362 0.79 -0.5 116,185 - H281DRAFT_05362 0.79 -0.2 116,385 + +0.7 116,385 + -0.4 116,385 + -0.5 116,386 - -0.5 116,432 + H281DRAFT_05363 0.12 -0.9 116,432 + H281DRAFT_05363 0.12 -0.6 116,432 + H281DRAFT_05363 0.12 -0.4 116,433 - H281DRAFT_05363 0.12 -0.1 116,433 - H281DRAFT_05363 0.12 -0.6 116,433 - H281DRAFT_05363 0.12 -0.8 116,433 - H281DRAFT_05363 0.12 +0.9 116,433 - H281DRAFT_05363 0.12 +0.4 116,433 - H281DRAFT_05363 0.12 -0.5 116,433 - H281DRAFT_05363 0.12 -0.3 116,433 - H281DRAFT_05363 0.12 -0.4 116,433 - H281DRAFT_05363 0.12 -0.2 116,912 + -0.5 116,912 + -1.8 116,913 - +2.4 116,916 + -1.6 116,917 - +0.4 116,917 - +0.2 116,917 - -1.0 117,236 - H281DRAFT_05364 0.21 +0.1 117,236 - H281DRAFT_05364 0.21 -0.4 117,364 + H281DRAFT_05364 0.29 +1.2 117,365 - H281DRAFT_05364 0.29 -0.0 117,365 - H281DRAFT_05364 0.29 +0.6 117,451 + H281DRAFT_05364 0.35 +0.4 117,452 - H281DRAFT_05364 0.35 -1.1 117,452 - H281DRAFT_05364 0.35 +0.8 117,637 + H281DRAFT_05364 0.47 -0.4 117,638 - H281DRAFT_05364 0.48 +0.6 117,747 + H281DRAFT_05364 0.55 +0.3 117,747 + H281DRAFT_05364 0.55 +0.0 117,754 + H281DRAFT_05364 0.55 +0.0 117,754 + H281DRAFT_05364 0.55 -0.2 117,754 + H281DRAFT_05364 0.55 +3.0 117,754 + H281DRAFT_05364 0.55 +0.4 117,937 - H281DRAFT_05364 0.68 +0.0 118,006 + H281DRAFT_05364 0.72 -0.4 118,051 + H281DRAFT_05364 0.75 -1.2 118,102 + H281DRAFT_05364 0.79 -0.7 118,102 + H281DRAFT_05364 0.79 -0.3 118,220 - H281DRAFT_05364 0.87 +0.2 118,418 - +0.9 118,691 + H281DRAFT_05365 0.39 +0.2 118,709 - H281DRAFT_05365 0.43 -0.9 118,709 - H281DRAFT_05365 0.43 -2.3 118,802 + H281DRAFT_05365 0.62 +0.2 118,803 - H281DRAFT_05365 0.62 -1.3 118,813 + H281DRAFT_05365 0.64 -0.3 118,813 + H281DRAFT_05365 0.64 -0.2 118,885 + H281DRAFT_05365 0.78 -0.5 118,885 + H281DRAFT_05365 0.78 -1.2 118,886 - H281DRAFT_05365 0.78 -0.5 118,886 - H281DRAFT_05365 0.78 -0.5 118,984 + -1.8 118,985 - -0.2 118,985 - -1.2 119,058 + +0.6 119,059 - -0.5 119,283 + H281DRAFT_05366 0.42 +0.3 119,283 + H281DRAFT_05366 0.42 +0.1 119,284 - H281DRAFT_05366 0.43 -0.8 119,284 - H281DRAFT_05366 0.43 +0.1 119,284 - H281DRAFT_05366 0.43 -1.3 119,284 - H281DRAFT_05366 0.43 -0.4 119,326 - H281DRAFT_05366 0.51 -1.0 119,386 + H281DRAFT_05366 0.64 -0.3 119,387 - H281DRAFT_05366 0.64 -0.2
Or see this region's nucleotide sequence