Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05318 and H281DRAFT_05319 are separated by 183 nucleotides H281DRAFT_05319 and H281DRAFT_05320 are separated by 233 nucleotides
H281DRAFT_05318: H281DRAFT_05318 - MFS transporter, ACS family, glucarate transporter, at 68,372 to 69,721
_05318
H281DRAFT_05319: H281DRAFT_05319 - 5-dehydro-4-deoxyglucarate dehydratase, at 69,905 to 70,822
_05319
H281DRAFT_05320: H281DRAFT_05320 - galactarate dehydratase, at 71,056 to 72,645
_05320
Position (kb)
69
70
71 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 68.911 kb on - strand, within H281DRAFT_05318 at 68.931 kb on + strand, within H281DRAFT_05318 at 69.028 kb on + strand, within H281DRAFT_05318 at 69.029 kb on - strand, within H281DRAFT_05318 at 69.066 kb on + strand, within H281DRAFT_05318 at 69.066 kb on + strand, within H281DRAFT_05318 at 69.067 kb on - strand, within H281DRAFT_05318 at 69.143 kb on + strand, within H281DRAFT_05318 at 69.169 kb on - strand, within H281DRAFT_05318 at 69.221 kb on + strand, within H281DRAFT_05318 at 69.221 kb on + strand, within H281DRAFT_05318 at 69.237 kb on + strand, within H281DRAFT_05318 at 69.517 kb on - strand, within H281DRAFT_05318 at 69.517 kb on - strand, within H281DRAFT_05318 at 69.543 kb on + strand, within H281DRAFT_05318 at 69.544 kb on - strand, within H281DRAFT_05318 at 69.544 kb on - strand, within H281DRAFT_05318 at 69.622 kb on - strand at 69.638 kb on + strand at 69.639 kb on - strand at 69.646 kb on + strand at 69.647 kb on - strand at 69.733 kb on + strand at 69.733 kb on + strand at 69.734 kb on - strand at 69.740 kb on + strand at 69.740 kb on + strand at 69.741 kb on - strand at 69.741 kb on - strand at 69.741 kb on - strand at 70.173 kb on - strand, within H281DRAFT_05319 at 70.209 kb on + strand, within H281DRAFT_05319 at 70.210 kb on - strand, within H281DRAFT_05319 at 70.395 kb on + strand, within H281DRAFT_05319 at 70.395 kb on + strand, within H281DRAFT_05319 at 70.396 kb on - strand, within H281DRAFT_05319 at 70.479 kb on + strand, within H281DRAFT_05319 at 70.479 kb on + strand, within H281DRAFT_05319 at 70.480 kb on - strand, within H281DRAFT_05319 at 70.639 kb on + strand, within H281DRAFT_05319 at 70.640 kb on - strand, within H281DRAFT_05319 at 70.722 kb on + strand, within H281DRAFT_05319 at 70.816 kb on + strand at 70.816 kb on + strand at 70.817 kb on - strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.827 kb on + strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.828 kb on - strand at 70.832 kb on - strand at 70.846 kb on - strand at 70.947 kb on + strand at 70.948 kb on - strand at 70.948 kb on - strand at 70.948 kb on - strand at 70.968 kb on + strand at 70.968 kb on + strand at 70.968 kb on + strand at 70.968 kb on + strand at 70.968 kb on + strand at 70.969 kb on - strand at 71.074 kb on + strand at 71.237 kb on - strand, within H281DRAFT_05320 at 71.238 kb on + strand, within H281DRAFT_05320 at 71.238 kb on + strand, within H281DRAFT_05320 at 71.560 kb on + strand, within H281DRAFT_05320 at 71.560 kb on + strand, within H281DRAFT_05320 at 71.560 kb on + strand, within H281DRAFT_05320 at 71.560 kb on + strand, within H281DRAFT_05320 at 71.561 kb on - strand, within H281DRAFT_05320 at 71.561 kb on - strand, within H281DRAFT_05320 at 71.561 kb on - strand, within H281DRAFT_05320 at 71.623 kb on - strand, within H281DRAFT_05320
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 68,911 - H281DRAFT_05318 0.40 -0.5 68,931 + H281DRAFT_05318 0.41 +0.4 69,028 + H281DRAFT_05318 0.49 -3.6 69,029 - H281DRAFT_05318 0.49 -1.0 69,066 + H281DRAFT_05318 0.51 +0.3 69,066 + H281DRAFT_05318 0.51 +0.2 69,067 - H281DRAFT_05318 0.51 -0.6 69,143 + H281DRAFT_05318 0.57 +0.5 69,169 - H281DRAFT_05318 0.59 +0.0 69,221 + H281DRAFT_05318 0.63 +1.5 69,221 + H281DRAFT_05318 0.63 +0.1 69,237 + H281DRAFT_05318 0.64 -0.2 69,517 - H281DRAFT_05318 0.85 -0.8 69,517 - H281DRAFT_05318 0.85 +0.8 69,543 + H281DRAFT_05318 0.87 +0.3 69,544 - H281DRAFT_05318 0.87 -0.3 69,544 - H281DRAFT_05318 0.87 -0.4 69,622 - +0.8 69,638 + -0.0 69,639 - +0.2 69,646 + +0.4 69,647 - +0.1 69,733 + -0.4 69,733 + -0.2 69,734 - +0.5 69,740 + -0.2 69,740 + +1.0 69,741 - -0.2 69,741 - +1.1 69,741 - -1.1 70,173 - H281DRAFT_05319 0.29 +0.8 70,209 + H281DRAFT_05319 0.33 -0.3 70,210 - H281DRAFT_05319 0.33 +0.4 70,395 + H281DRAFT_05319 0.53 -0.6 70,395 + H281DRAFT_05319 0.53 -0.3 70,396 - H281DRAFT_05319 0.53 +0.6 70,479 + H281DRAFT_05319 0.63 +0.2 70,479 + H281DRAFT_05319 0.63 -1.0 70,480 - H281DRAFT_05319 0.63 -1.3 70,639 + H281DRAFT_05319 0.80 -1.7 70,640 - H281DRAFT_05319 0.80 +1.0 70,722 + H281DRAFT_05319 0.89 -0.7 70,816 + -0.8 70,816 + +0.3 70,817 - +0.3 70,827 + -0.4 70,827 + -0.6 70,827 + +0.4 70,827 + -0.1 70,827 + -0.8 70,827 + +1.1 70,827 + +0.5 70,828 - -0.5 70,828 - +0.4 70,828 - -0.3 70,828 - +0.1 70,828 - -0.1 70,828 - -0.5 70,828 - +0.2 70,828 - +0.2 70,832 - -0.9 70,846 - +0.3 70,947 + -1.0 70,948 - +0.1 70,948 - -0.6 70,948 - +0.2 70,968 + +0.5 70,968 + +0.8 70,968 + -1.2 70,968 + -0.1 70,968 + -0.3 70,969 - -1.0 71,074 + -0.6 71,237 - H281DRAFT_05320 0.11 -0.2 71,238 + H281DRAFT_05320 0.11 +1.0 71,238 + H281DRAFT_05320 0.11 -0.9 71,560 + H281DRAFT_05320 0.32 +0.7 71,560 + H281DRAFT_05320 0.32 +0.7 71,560 + H281DRAFT_05320 0.32 -0.1 71,560 + H281DRAFT_05320 0.32 +0.1 71,561 - H281DRAFT_05320 0.32 -1.3 71,561 - H281DRAFT_05320 0.32 +0.3 71,561 - H281DRAFT_05320 0.32 -0.5 71,623 - H281DRAFT_05320 0.36 -0.1
Or see this region's nucleotide sequence