Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05206 and H281DRAFT_05207 are separated by 22 nucleotides H281DRAFT_05207 and H281DRAFT_05208 are separated by 159 nucleotides H281DRAFT_05208 and H281DRAFT_05209 are separated by 116 nucleotides
H281DRAFT_05206: H281DRAFT_05206 - chloride channel protein, CIC family, at 167,506 to 169,329
_05206
H281DRAFT_05207: H281DRAFT_05207 - glutathione S-transferase, at 169,352 to 170,089
_05207
H281DRAFT_05208: H281DRAFT_05208 - conserved hypothetical integral membrane protein, at 170,249 to 171,337
_05208
H281DRAFT_05209: H281DRAFT_05209 - transcriptional regulator, LysR family, at 171,454 to 172,344
_05209
Position (kb) 170
171
172 Strain fitness (log2 ratio) -2
-1
0
1
2 at 169.405 kb on + strand at 169.530 kb on + strand, within H281DRAFT_05207 at 169.531 kb on - strand, within H281DRAFT_05207 at 169.600 kb on + strand, within H281DRAFT_05207 at 169.639 kb on - strand, within H281DRAFT_05207 at 169.714 kb on - strand, within H281DRAFT_05207 at 169.717 kb on - strand, within H281DRAFT_05207 at 169.717 kb on - strand, within H281DRAFT_05207 at 169.800 kb on + strand, within H281DRAFT_05207 at 169.800 kb on + strand, within H281DRAFT_05207 at 169.801 kb on - strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.848 kb on + strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 169.849 kb on - strand, within H281DRAFT_05207 at 170.005 kb on - strand, within H281DRAFT_05207 at 170.005 kb on - strand, within H281DRAFT_05207 at 170.071 kb on - strand at 170.074 kb on - strand at 170.250 kb on + strand at 170.306 kb on + strand at 170.306 kb on + strand at 170.307 kb on - strand at 170.307 kb on - strand at 170.310 kb on + strand at 170.311 kb on - strand at 170.435 kb on - strand, within H281DRAFT_05208 at 170.548 kb on + strand, within H281DRAFT_05208 at 170.548 kb on + strand, within H281DRAFT_05208 at 170.656 kb on + strand, within H281DRAFT_05208 at 170.657 kb on - strand, within H281DRAFT_05208 at 171.370 kb on - strand at 171.386 kb on + strand at 171.390 kb on + strand at 171.391 kb on - strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.392 kb on + strand at 171.393 kb on - strand at 171.393 kb on - strand at 171.595 kb on + strand, within H281DRAFT_05209 at 171.595 kb on + strand, within H281DRAFT_05209 at 171.596 kb on - strand, within H281DRAFT_05209 at 171.694 kb on + strand, within H281DRAFT_05209 at 171.694 kb on + strand, within H281DRAFT_05209 at 171.694 kb on + strand, within H281DRAFT_05209 at 171.694 kb on + strand, within H281DRAFT_05209 at 171.695 kb on - strand, within H281DRAFT_05209 at 171.695 kb on - strand, within H281DRAFT_05209 at 171.695 kb on - strand, within H281DRAFT_05209 at 171.695 kb on - strand, within H281DRAFT_05209 at 171.696 kb on + strand, within H281DRAFT_05209 at 171.697 kb on - strand, within H281DRAFT_05209 at 171.763 kb on + strand, within H281DRAFT_05209 at 171.764 kb on - strand, within H281DRAFT_05209 at 171.838 kb on - strand, within H281DRAFT_05209 at 171.873 kb on + strand, within H281DRAFT_05209
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 169,405 + +1.1 169,530 + H281DRAFT_05207 0.24 -0.1 169,531 - H281DRAFT_05207 0.24 -0.3 169,600 + H281DRAFT_05207 0.34 -0.0 169,639 - H281DRAFT_05207 0.39 +0.3 169,714 - H281DRAFT_05207 0.49 -0.4 169,717 - H281DRAFT_05207 0.49 +1.0 169,717 - H281DRAFT_05207 0.49 +1.0 169,800 + H281DRAFT_05207 0.61 -0.6 169,800 + H281DRAFT_05207 0.61 -0.2 169,801 - H281DRAFT_05207 0.61 +0.5 169,848 + H281DRAFT_05207 0.67 +2.4 169,848 + H281DRAFT_05207 0.67 +0.1 169,848 + H281DRAFT_05207 0.67 +0.0 169,849 - H281DRAFT_05207 0.67 -0.0 169,849 - H281DRAFT_05207 0.67 +0.6 169,849 - H281DRAFT_05207 0.67 +0.0 169,849 - H281DRAFT_05207 0.67 -1.0 170,005 - H281DRAFT_05207 0.88 -2.2 170,005 - H281DRAFT_05207 0.88 +0.5 170,071 - +2.6 170,074 - -0.6 170,250 + -1.8 170,306 + +0.0 170,306 + -0.2 170,307 - -0.1 170,307 - -0.3 170,310 + +0.5 170,311 - +0.2 170,435 - H281DRAFT_05208 0.17 -0.6 170,548 + H281DRAFT_05208 0.27 -1.0 170,548 + H281DRAFT_05208 0.27 -0.6 170,656 + H281DRAFT_05208 0.37 -0.5 170,657 - H281DRAFT_05208 0.37 -0.4 171,370 - -0.8 171,386 + +0.8 171,390 + -0.7 171,391 - +1.2 171,392 + -1.2 171,392 + -0.7 171,392 + -0.1 171,392 + -0.5 171,392 + -0.5 171,392 + +0.8 171,392 + -0.6 171,392 + +0.3 171,392 + -0.1 171,393 - -0.8 171,393 - +0.3 171,595 + H281DRAFT_05209 0.16 +0.5 171,595 + H281DRAFT_05209 0.16 -0.6 171,596 - H281DRAFT_05209 0.16 -0.7 171,694 + H281DRAFT_05209 0.27 +0.1 171,694 + H281DRAFT_05209 0.27 +0.2 171,694 + H281DRAFT_05209 0.27 -0.5 171,694 + H281DRAFT_05209 0.27 +0.3 171,695 - H281DRAFT_05209 0.27 +0.3 171,695 - H281DRAFT_05209 0.27 +0.0 171,695 - H281DRAFT_05209 0.27 -0.1 171,695 - H281DRAFT_05209 0.27 +0.3 171,696 + H281DRAFT_05209 0.27 -1.9 171,697 - H281DRAFT_05209 0.27 -0.0 171,763 + H281DRAFT_05209 0.35 -1.3 171,764 - H281DRAFT_05209 0.35 -1.2 171,838 - H281DRAFT_05209 0.43 -0.6 171,873 + H281DRAFT_05209 0.47 -0.2
Or see this region's nucleotide sequence