Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05150 and H281DRAFT_05151 are separated by 352 nucleotides H281DRAFT_05151 and H281DRAFT_05152 are separated by 117 nucleotides H281DRAFT_05152 and H281DRAFT_05153 are separated by 83 nucleotides H281DRAFT_05153 and H281DRAFT_05154 are separated by 49 nucleotides
H281DRAFT_05150: H281DRAFT_05150 - 2'-5' RNA ligase, at 104,549 to 105,154
_05150
H281DRAFT_05151: H281DRAFT_05151 - hypothetical protein, at 105,507 to 105,671
_05151
H281DRAFT_05152: H281DRAFT_05152 - protein of unknown function (DUF1992), at 105,789 to 106,220
_05152
H281DRAFT_05153: H281DRAFT_05153 - tRNA(adenine34) deaminase, at 106,304 to 106,987
_05153
H281DRAFT_05154: H281DRAFT_05154 - murein tetrapeptidase LD-carboxypeptidase (EC:3.4.17.13). Serine peptidase. MEROPS family S66, at 107,037 to 107,963
_05154
Position (kb)
105
106
107 Strain fitness (log2 ratio)
-1
0
1
2 at 104.990 kb on + strand, within H281DRAFT_05150 at 104.992 kb on + strand, within H281DRAFT_05150 at 104.992 kb on + strand, within H281DRAFT_05150 at 105.085 kb on - strand, within H281DRAFT_05150 at 105.093 kb on + strand, within H281DRAFT_05150 at 105.112 kb on + strand at 105.113 kb on - strand at 105.113 kb on - strand at 105.173 kb on + strand at 105.262 kb on - strand at 105.271 kb on + strand at 105.330 kb on - strand at 105.374 kb on + strand at 105.375 kb on - strand at 105.391 kb on + strand at 105.392 kb on - strand at 105.484 kb on + strand at 105.485 kb on - strand at 105.485 kb on - strand at 105.577 kb on + strand, within H281DRAFT_05151 at 105.590 kb on + strand, within H281DRAFT_05151 at 105.755 kb on + strand at 105.756 kb on - strand at 105.776 kb on + strand at 105.821 kb on + strand at 106.315 kb on + strand at 107.032 kb on + strand at 107.152 kb on + strand, within H281DRAFT_05154 at 107.153 kb on - strand, within H281DRAFT_05154 at 107.153 kb on - strand, within H281DRAFT_05154
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 104,990 + H281DRAFT_05150 0.73 -0.4 104,992 + H281DRAFT_05150 0.73 +0.3 104,992 + H281DRAFT_05150 0.73 -0.2 105,085 - H281DRAFT_05150 0.88 -0.6 105,093 + H281DRAFT_05150 0.90 +0.2 105,112 + +1.9 105,113 - +0.8 105,113 - -0.2 105,173 + +0.2 105,262 - +1.4 105,271 + +0.0 105,330 - +0.7 105,374 + +0.8 105,375 - +0.6 105,391 + -0.5 105,392 - -0.3 105,484 + +0.2 105,485 - +0.1 105,485 - -0.2 105,577 + H281DRAFT_05151 0.42 -0.3 105,590 + H281DRAFT_05151 0.50 -0.2 105,755 + -0.4 105,756 - +1.3 105,776 + -0.2 105,821 + +0.1 106,315 + -0.2 107,032 + +0.8 107,152 + H281DRAFT_05154 0.12 +1.2 107,153 - H281DRAFT_05154 0.13 -0.2 107,153 - H281DRAFT_05154 0.13 -1.3
Or see this region's nucleotide sequence