Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05138 and H281DRAFT_05139 are separated by 168 nucleotides H281DRAFT_05139 and H281DRAFT_05140 are separated by 91 nucleotides H281DRAFT_05140 and H281DRAFT_05141 are separated by 2 nucleotides H281DRAFT_05141 and H281DRAFT_05142 are separated by 58 nucleotides
H281DRAFT_05138: H281DRAFT_05138 - Predicted amino acid dehydrogenase, at 92,618 to 93,832
_05138
H281DRAFT_05139: H281DRAFT_05139 - Copper binding protein CusF, at 94,001 to 94,258
_05139
H281DRAFT_05140: H281DRAFT_05140 - Thiosulfate reductase cytochrome b subunit, at 94,350 to 94,997
_05140
H281DRAFT_05141: H281DRAFT_05141 - sulfoxide reductase catalytic subunit YedY, at 95,000 to 95,791
_05141
H281DRAFT_05142: H281DRAFT_05142 - hypothetical protein, at 95,850 to 96,464
_05142
Position (kb) 94
95 Strain fitness (log2 ratio) -1
0
1
2
3 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.375 kb on + strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.376 kb on - strand, within H281DRAFT_05138 at 93.387 kb on + strand, within H281DRAFT_05138 at 93.388 kb on - strand, within H281DRAFT_05138 at 93.652 kb on + strand, within H281DRAFT_05138 at 93.816 kb on + strand at 93.817 kb on - strand at 93.922 kb on + strand at 94.334 kb on + strand at 94.335 kb on - strand at 94.411 kb on - strand at 94.626 kb on + strand, within H281DRAFT_05140 at 94.626 kb on + strand, within H281DRAFT_05140 at 94.626 kb on + strand, within H281DRAFT_05140 at 94.627 kb on - strand, within H281DRAFT_05140 at 94.753 kb on - strand, within H281DRAFT_05140 at 94.776 kb on + strand at 94.776 kb on + strand, within H281DRAFT_05140 at 95.310 kb on - strand, within H281DRAFT_05141 at 95.310 kb on - strand, within H281DRAFT_05141 at 95.310 kb on - strand, within H281DRAFT_05141 at 95.315 kb on - strand, within H281DRAFT_05141 at 95.443 kb on + strand, within H281DRAFT_05141 at 95.443 kb on + strand, within H281DRAFT_05141 at 95.538 kb on - strand, within H281DRAFT_05141 at 95.565 kb on - strand, within H281DRAFT_05141 at 95.651 kb on + strand, within H281DRAFT_05141 at 95.652 kb on - strand, within H281DRAFT_05141 at 95.739 kb on - strand at 95.769 kb on - strand at 95.846 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 93,375 + H281DRAFT_05138 0.62 -0.1 93,375 + H281DRAFT_05138 0.62 -1.0 93,376 - H281DRAFT_05138 0.62 +1.2 93,376 - H281DRAFT_05138 0.62 +0.4 93,387 + H281DRAFT_05138 0.63 -0.3 93,388 - H281DRAFT_05138 0.63 +0.4 93,652 + H281DRAFT_05138 0.85 -0.0 93,816 + +0.3 93,817 - +0.4 93,922 + -0.8 94,334 + +0.9 94,335 - -0.5 94,411 - +0.1 94,626 + H281DRAFT_05140 0.43 +0.7 94,626 + H281DRAFT_05140 0.43 -0.0 94,626 + H281DRAFT_05140 0.43 +0.1 94,627 - H281DRAFT_05140 0.43 +1.3 94,753 - H281DRAFT_05140 0.62 +1.8 94,776 + +2.8 94,776 + H281DRAFT_05140 0.66 +0.8 95,310 - H281DRAFT_05141 0.39 -1.4 95,310 - H281DRAFT_05141 0.39 +0.3 95,310 - H281DRAFT_05141 0.39 -0.5 95,315 - H281DRAFT_05141 0.40 +0.3 95,443 + H281DRAFT_05141 0.56 -0.8 95,443 + H281DRAFT_05141 0.56 -0.4 95,538 - H281DRAFT_05141 0.68 +0.8 95,565 - H281DRAFT_05141 0.71 -0.1 95,651 + H281DRAFT_05141 0.82 -0.3 95,652 - H281DRAFT_05141 0.82 +0.7 95,739 - +1.2 95,769 - -0.2 95,846 - -0.2
Or see this region's nucleotide sequence