Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05132 and H281DRAFT_05133 are separated by 116 nucleotides H281DRAFT_05133 and H281DRAFT_05134 are separated by 101 nucleotides
H281DRAFT_05132: H281DRAFT_05132 - 3-oxoacyl-[acyl-carrier protein] reductase, at 81,809 to 83,260
_05132
H281DRAFT_05133: H281DRAFT_05133 - acyl-CoA dehydrogenase, at 83,377 to 85,875
_05133
H281DRAFT_05134: H281DRAFT_05134 - transcriptional regulator, TetR family, at 85,977 to 86,810
_05134
Position (kb) 83
84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2 at 82.650 kb on + strand, within H281DRAFT_05132 at 82.650 kb on + strand, within H281DRAFT_05132 at 82.650 kb on + strand, within H281DRAFT_05132 at 82.651 kb on - strand, within H281DRAFT_05132 at 82.651 kb on - strand, within H281DRAFT_05132 at 82.720 kb on - strand, within H281DRAFT_05132 at 82.849 kb on + strand, within H281DRAFT_05132 at 83.248 kb on - strand at 83.261 kb on - strand at 83.261 kb on - strand at 83.711 kb on + strand, within H281DRAFT_05133 at 83.712 kb on - strand, within H281DRAFT_05133 at 84.125 kb on + strand, within H281DRAFT_05133 at 84.125 kb on + strand, within H281DRAFT_05133 at 84.311 kb on + strand, within H281DRAFT_05133 at 84.312 kb on - strand, within H281DRAFT_05133 at 84.312 kb on - strand, within H281DRAFT_05133 at 84.408 kb on - strand, within H281DRAFT_05133 at 84.509 kb on + strand, within H281DRAFT_05133 at 84.593 kb on + strand, within H281DRAFT_05133 at 84.593 kb on + strand, within H281DRAFT_05133 at 84.594 kb on - strand, within H281DRAFT_05133 at 84.936 kb on + strand, within H281DRAFT_05133 at 85.030 kb on - strand, within H281DRAFT_05133 at 85.031 kb on + strand, within H281DRAFT_05133 at 85.032 kb on - strand, within H281DRAFT_05133 at 85.194 kb on - strand, within H281DRAFT_05133 at 85.808 kb on - strand at 85.826 kb on + strand at 85.827 kb on - strand at 86.070 kb on - strand, within H281DRAFT_05134 at 86.392 kb on + strand, within H281DRAFT_05134 at 86.435 kb on + strand, within H281DRAFT_05134 at 86.660 kb on - strand, within H281DRAFT_05134 at 86.860 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 82,650 + H281DRAFT_05132 0.58 -0.4 82,650 + H281DRAFT_05132 0.58 +1.1 82,650 + H281DRAFT_05132 0.58 +0.5 82,651 - H281DRAFT_05132 0.58 -0.1 82,651 - H281DRAFT_05132 0.58 +0.6 82,720 - H281DRAFT_05132 0.63 -0.5 82,849 + H281DRAFT_05132 0.72 +0.4 83,248 - +0.9 83,261 - -0.3 83,261 - +1.3 83,711 + H281DRAFT_05133 0.13 +1.3 83,712 - H281DRAFT_05133 0.13 +1.5 84,125 + H281DRAFT_05133 0.30 +0.6 84,125 + H281DRAFT_05133 0.30 -1.2 84,311 + H281DRAFT_05133 0.37 +0.3 84,312 - H281DRAFT_05133 0.37 +0.1 84,312 - H281DRAFT_05133 0.37 -0.8 84,408 - H281DRAFT_05133 0.41 -1.6 84,509 + H281DRAFT_05133 0.45 -0.1 84,593 + H281DRAFT_05133 0.49 +0.8 84,593 + H281DRAFT_05133 0.49 +0.5 84,594 - H281DRAFT_05133 0.49 -0.4 84,936 + H281DRAFT_05133 0.62 +0.8 85,030 - H281DRAFT_05133 0.66 -0.1 85,031 + H281DRAFT_05133 0.66 -0.2 85,032 - H281DRAFT_05133 0.66 +0.2 85,194 - H281DRAFT_05133 0.73 -2.0 85,808 - -0.1 85,826 + -0.1 85,827 - +0.4 86,070 - H281DRAFT_05134 0.11 +0.1 86,392 + H281DRAFT_05134 0.50 +0.3 86,435 + H281DRAFT_05134 0.55 +1.8 86,660 - H281DRAFT_05134 0.82 +0.8 86,860 - +0.3
Or see this region's nucleotide sequence