Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04978 and H281DRAFT_04979 are separated by 48 nucleotides H281DRAFT_04979 and H281DRAFT_04980 are separated by 228 nucleotides H281DRAFT_04980 and H281DRAFT_04981 are separated by 221 nucleotides
H281DRAFT_04978: H281DRAFT_04978 - 23S rRNA (adenine2030-N6)-methyltransferase, at 162,840 to 163,904
_04978
H281DRAFT_04979: H281DRAFT_04979 - NitT/TauT family transport system substrate-binding protein, at 163,953 to 164,990
_04979
H281DRAFT_04980: H281DRAFT_04980 - hypothetical protein, at 165,219 to 165,596
_04980
H281DRAFT_04981: H281DRAFT_04981 - Protein of unknown function (DUF3563), at 165,818 to 165,964
_04981
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2 at 163.132 kb on + strand, within H281DRAFT_04978 at 163.132 kb on + strand, within H281DRAFT_04978 at 163.133 kb on - strand, within H281DRAFT_04978 at 163.140 kb on + strand, within H281DRAFT_04978 at 163.170 kb on + strand, within H281DRAFT_04978 at 163.170 kb on + strand, within H281DRAFT_04978 at 163.171 kb on - strand, within H281DRAFT_04978 at 163.200 kb on + strand, within H281DRAFT_04978 at 163.219 kb on - strand, within H281DRAFT_04978 at 163.300 kb on - strand, within H281DRAFT_04978 at 163.362 kb on + strand, within H281DRAFT_04978 at 163.398 kb on - strand, within H281DRAFT_04978 at 163.543 kb on + strand, within H281DRAFT_04978 at 163.543 kb on + strand, within H281DRAFT_04978 at 163.561 kb on - strand, within H281DRAFT_04978 at 163.632 kb on - strand, within H281DRAFT_04978 at 163.635 kb on + strand, within H281DRAFT_04978 at 163.994 kb on + strand at 163.994 kb on + strand at 163.995 kb on - strand at 163.995 kb on - strand at 163.996 kb on + strand at 163.997 kb on - strand at 163.997 kb on - strand at 164.105 kb on - strand, within H281DRAFT_04979 at 164.120 kb on + strand, within H281DRAFT_04979 at 164.137 kb on + strand, within H281DRAFT_04979 at 164.138 kb on - strand, within H281DRAFT_04979 at 164.274 kb on - strand, within H281DRAFT_04979 at 164.470 kb on - strand, within H281DRAFT_04979 at 164.470 kb on - strand, within H281DRAFT_04979 at 164.697 kb on + strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.698 kb on - strand, within H281DRAFT_04979 at 164.849 kb on - strand, within H281DRAFT_04979 at 164.851 kb on + strand, within H281DRAFT_04979 at 165.008 kb on + strand at 165.008 kb on + strand at 165.009 kb on - strand at 165.009 kb on - strand at 165.009 kb on - strand at 165.195 kb on - strand at 165.266 kb on - strand, within H281DRAFT_04980 at 165.277 kb on + strand, within H281DRAFT_04980 at 165.328 kb on + strand, within H281DRAFT_04980 at 165.329 kb on - strand, within H281DRAFT_04980 at 165.329 kb on - strand, within H281DRAFT_04980 at 165.646 kb on + strand at 165.647 kb on - strand at 165.674 kb on + strand at 165.675 kb on - strand at 165.775 kb on - strand at 165.785 kb on + strand at 165.786 kb on - strand at 165.786 kb on - strand at 165.819 kb on + strand at 165.894 kb on + strand, within H281DRAFT_04981 at 165.894 kb on + strand, within H281DRAFT_04981 at 165.895 kb on - strand, within H281DRAFT_04981 at 165.895 kb on - strand, within H281DRAFT_04981 at 165.954 kb on + strand at 165.954 kb on + strand at 165.954 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 163,132 + H281DRAFT_04978 0.27 -0.1 163,132 + H281DRAFT_04978 0.27 -0.9 163,133 - H281DRAFT_04978 0.28 +0.5 163,140 + H281DRAFT_04978 0.28 +0.1 163,170 + H281DRAFT_04978 0.31 +0.5 163,170 + H281DRAFT_04978 0.31 -0.6 163,171 - H281DRAFT_04978 0.31 -0.6 163,200 + H281DRAFT_04978 0.34 +0.4 163,219 - H281DRAFT_04978 0.36 -0.0 163,300 - H281DRAFT_04978 0.43 -1.1 163,362 + H281DRAFT_04978 0.49 -0.2 163,398 - H281DRAFT_04978 0.52 -0.5 163,543 + H281DRAFT_04978 0.66 +0.1 163,543 + H281DRAFT_04978 0.66 -0.1 163,561 - H281DRAFT_04978 0.68 -0.8 163,632 - H281DRAFT_04978 0.74 +0.1 163,635 + H281DRAFT_04978 0.75 +0.1 163,994 + -0.1 163,994 + -0.6 163,995 - +0.9 163,995 - -0.3 163,996 + -2.0 163,997 - -0.3 163,997 - +0.5 164,105 - H281DRAFT_04979 0.15 -1.7 164,120 + H281DRAFT_04979 0.16 +0.2 164,137 + H281DRAFT_04979 0.18 +0.1 164,138 - H281DRAFT_04979 0.18 -0.3 164,274 - H281DRAFT_04979 0.31 +0.3 164,470 - H281DRAFT_04979 0.50 -0.7 164,470 - H281DRAFT_04979 0.50 -1.0 164,697 + H281DRAFT_04979 0.72 -0.5 164,698 - H281DRAFT_04979 0.72 -0.2 164,698 - H281DRAFT_04979 0.72 +0.1 164,698 - H281DRAFT_04979 0.72 +0.1 164,698 - H281DRAFT_04979 0.72 +0.5 164,698 - H281DRAFT_04979 0.72 +0.1 164,698 - H281DRAFT_04979 0.72 -0.1 164,698 - H281DRAFT_04979 0.72 +0.0 164,698 - H281DRAFT_04979 0.72 -1.2 164,849 - H281DRAFT_04979 0.86 -0.1 164,851 + H281DRAFT_04979 0.87 -1.8 165,008 + -0.3 165,008 + -0.1 165,009 - +0.9 165,009 - -0.8 165,009 - -0.0 165,195 - +0.3 165,266 - H281DRAFT_04980 0.12 +0.6 165,277 + H281DRAFT_04980 0.15 -0.9 165,328 + H281DRAFT_04980 0.29 -0.1 165,329 - H281DRAFT_04980 0.29 +1.9 165,329 - H281DRAFT_04980 0.29 +1.1 165,646 + -0.4 165,647 - -0.7 165,674 + +0.1 165,675 - +1.2 165,775 - +0.0 165,785 + +0.5 165,786 - -0.5 165,786 - +0.8 165,819 + +0.7 165,894 + H281DRAFT_04981 0.52 +0.2 165,894 + H281DRAFT_04981 0.52 +0.4 165,895 - H281DRAFT_04981 0.52 -0.0 165,895 - H281DRAFT_04981 0.52 -0.3 165,954 + -0.5 165,954 + +0.3 165,954 + -0.8
Or see this region's nucleotide sequence