Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04931 and H281DRAFT_04932 are separated by 18 nucleotides H281DRAFT_04932 and H281DRAFT_04933 are separated by 302 nucleotides H281DRAFT_04933 and H281DRAFT_04934 are separated by 256 nucleotides H281DRAFT_04934 and H281DRAFT_04935 are separated by 161 nucleotides
H281DRAFT_04931: H281DRAFT_04931 - Surfactin synthase thioesterase subunit, at 113,917 to 114,735
_04931
H281DRAFT_04932: H281DRAFT_04932 - MbtH protein, at 114,754 to 114,987
_04932
H281DRAFT_04933: H281DRAFT_04933 - Nitroreductase, at 115,290 to 115,913
_04933
H281DRAFT_04934: H281DRAFT_04934 - Sensors of blue-light using FAD, at 116,170 to 116,685
_04934
H281DRAFT_04935: H281DRAFT_04935 - D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4), at 116,847 to 118,499
_04935
Position (kb)
115
116 Strain fitness (log2 ratio)
-1
0
1
2 at 114.822 kb on + strand, within H281DRAFT_04932 at 114.911 kb on + strand, within H281DRAFT_04932 at 114.930 kb on - strand, within H281DRAFT_04932 at 114.946 kb on + strand, within H281DRAFT_04932 at 115.009 kb on + strand at 115.009 kb on + strand at 115.010 kb on - strand at 115.191 kb on + strand at 115.192 kb on - strand at 115.281 kb on + strand at 115.295 kb on + strand at 115.295 kb on + strand at 115.295 kb on + strand at 115.295 kb on + strand at 115.296 kb on - strand at 115.296 kb on - strand at 115.296 kb on - strand at 115.417 kb on + strand, within H281DRAFT_04933 at 115.882 kb on + strand at 116.129 kb on - strand at 116.132 kb on - strand at 116.170 kb on - strand at 116.170 kb on - strand at 116.261 kb on + strand, within H281DRAFT_04934 at 116.498 kb on - strand, within H281DRAFT_04934
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 114,822 + H281DRAFT_04932 0.29 +1.5 114,911 + H281DRAFT_04932 0.67 +1.0 114,930 - H281DRAFT_04932 0.75 -0.0 114,946 + H281DRAFT_04932 0.82 +0.7 115,009 + +1.0 115,009 + +0.8 115,010 - +2.5 115,191 + +0.7 115,192 - +1.5 115,281 + +0.1 115,295 + +0.2 115,295 + +0.9 115,295 + +0.7 115,295 + +0.2 115,296 - -0.6 115,296 - -0.3 115,296 - -0.4 115,417 + H281DRAFT_04933 0.20 -0.1 115,882 + +0.0 116,129 - -0.8 116,132 - -0.7 116,170 - +0.0 116,170 - -0.6 116,261 + H281DRAFT_04934 0.18 +0.4 116,498 - H281DRAFT_04934 0.64 -0.7
Or see this region's nucleotide sequence