Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04932

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04930 and H281DRAFT_04931 are separated by 100 nucleotidesH281DRAFT_04931 and H281DRAFT_04932 are separated by 18 nucleotidesH281DRAFT_04932 and H281DRAFT_04933 are separated by 302 nucleotides H281DRAFT_04930: H281DRAFT_04930 - Cupin domain, at 112,380 to 113,816 _04930 H281DRAFT_04931: H281DRAFT_04931 - Surfactin synthase thioesterase subunit, at 113,917 to 114,735 _04931 H281DRAFT_04932: H281DRAFT_04932 - MbtH protein, at 114,754 to 114,987 _04932 H281DRAFT_04933: H281DRAFT_04933 - Nitroreductase, at 115,290 to 115,913 _04933 Position (kb) 114 115Strain fitness (log2 ratio) -1 0 1 2at 113.756 kb on - strandat 114.089 kb on - strand, within H281DRAFT_04931at 114.201 kb on + strand, within H281DRAFT_04931at 114.201 kb on + strand, within H281DRAFT_04931at 114.822 kb on + strand, within H281DRAFT_04932at 114.911 kb on + strand, within H281DRAFT_04932at 114.930 kb on - strand, within H281DRAFT_04932at 114.946 kb on + strand, within H281DRAFT_04932at 115.009 kb on + strandat 115.009 kb on + strandat 115.010 kb on - strandat 115.191 kb on + strandat 115.192 kb on - strandat 115.281 kb on + strandat 115.295 kb on + strandat 115.295 kb on + strandat 115.295 kb on + strandat 115.295 kb on + strandat 115.296 kb on - strandat 115.296 kb on - strandat 115.296 kb on - strandat 115.417 kb on + strand, within H281DRAFT_04933at 115.882 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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113,756 - -0.4
114,089 - H281DRAFT_04931 0.21 +1.1
114,201 + H281DRAFT_04931 0.35 -1.5
114,201 + H281DRAFT_04931 0.35 +1.7
114,822 + H281DRAFT_04932 0.29 +1.5
114,911 + H281DRAFT_04932 0.67 +1.0
114,930 - H281DRAFT_04932 0.75 -0.0
114,946 + H281DRAFT_04932 0.82 +0.7
115,009 + +1.0
115,009 + +0.8
115,010 - +2.5
115,191 + +0.7
115,192 - +1.5
115,281 + +0.1
115,295 + +0.2
115,295 + +0.9
115,295 + +0.7
115,295 + +0.2
115,296 - -0.6
115,296 - -0.3
115,296 - -0.4
115,417 + H281DRAFT_04933 0.20 -0.1
115,882 + +0.0

Or see this region's nucleotide sequence