Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04881 and H281DRAFT_04882 are separated by 110 nucleotides H281DRAFT_04882 and H281DRAFT_04883 are separated by 97 nucleotides H281DRAFT_04883 and H281DRAFT_04884 are separated by 37 nucleotides
H281DRAFT_04881: H281DRAFT_04881 - Predicted arabinose efflux permease, MFS family, at 25,030 to 26,286
_04881
H281DRAFT_04882: H281DRAFT_04882 - transcriptional regulator, LysR family, at 26,397 to 27,290
_04882
H281DRAFT_04883: H281DRAFT_04883 - L-lysine exporter family protein LysE/ArgO, at 27,388 to 28,008
_04883
H281DRAFT_04884: H281DRAFT_04884 - extracellular protein, at 28,046 to 28,948
_04884
Position (kb) 26
27
28 Strain fitness (log2 ratio) -1
0
1 at 26.284 kb on + strand at 26.482 kb on + strand at 26.520 kb on + strand, within H281DRAFT_04882 at 27.316 kb on - strand at 27.330 kb on + strand at 27.422 kb on + strand at 27.781 kb on + strand, within H281DRAFT_04883 at 28.016 kb on + strand at 28.179 kb on + strand, within H281DRAFT_04884 at 28.180 kb on - strand, within H281DRAFT_04884 at 28.180 kb on - strand, within H281DRAFT_04884 at 28.261 kb on + strand, within H281DRAFT_04884 at 28.272 kb on + strand, within H281DRAFT_04884
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 26,284 + -0.1 26,482 + -1.4 26,520 + H281DRAFT_04882 0.14 +0.8 27,316 - +0.2 27,330 + -0.4 27,422 + -0.2 27,781 + H281DRAFT_04883 0.63 -0.5 28,016 + +1.5 28,179 + H281DRAFT_04884 0.15 -1.1 28,180 - H281DRAFT_04884 0.15 -0.6 28,180 - H281DRAFT_04884 0.15 -0.2 28,261 + H281DRAFT_04884 0.24 -0.2 28,272 + H281DRAFT_04884 0.25 +0.2
Or see this region's nucleotide sequence