Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04881

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04880 and H281DRAFT_04881 overlap by 4 nucleotidesH281DRAFT_04881 and H281DRAFT_04882 are separated by 110 nucleotides H281DRAFT_04880: H281DRAFT_04880 - PRC-barrel domain-containing protein, at 24,059 to 25,033 _04880 H281DRAFT_04881: H281DRAFT_04881 - Predicted arabinose efflux permease, MFS family, at 25,030 to 26,286 _04881 H281DRAFT_04882: H281DRAFT_04882 - transcriptional regulator, LysR family, at 26,397 to 27,290 _04882 Position (kb) 25 26 27Strain fitness (log2 ratio) -1 0 1at 24.412 kb on + strand, within H281DRAFT_04880at 24.412 kb on + strand, within H281DRAFT_04880at 24.412 kb on + strand, within H281DRAFT_04880at 25.136 kb on - strandat 26.284 kb on + strandat 26.482 kb on + strandat 26.520 kb on + strand, within H281DRAFT_04882

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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24,412 + H281DRAFT_04880 0.36 +1.4
24,412 + H281DRAFT_04880 0.36 +0.1
24,412 + H281DRAFT_04880 0.36 +1.4
25,136 - -0.9
26,284 + -0.1
26,482 + -1.4
26,520 + H281DRAFT_04882 0.14 +0.8

Or see this region's nucleotide sequence