Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04877 and H281DRAFT_04878 are separated by 91 nucleotides H281DRAFT_04878 and H281DRAFT_04879 are separated by 251 nucleotides H281DRAFT_04879 and H281DRAFT_04880 are separated by 466 nucleotides
H281DRAFT_04877: H281DRAFT_04877 - Predicted dithiol-disulfide oxidoreductase, DUF899 family, at 20,671 to 21,441
_04877
H281DRAFT_04878: H281DRAFT_04878 - transcriptional regulator, ArsR family, at 21,533 to 21,958
_04878
H281DRAFT_04879: H281DRAFT_04879 - putative MFS transporter, AGZA family, xanthine/uracil permease, at 22,210 to 23,592
_04879
H281DRAFT_04880: H281DRAFT_04880 - PRC-barrel domain-containing protein, at 24,059 to 25,033
_04880
Position (kb) 22
23
24 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 21.347 kb on - strand, within H281DRAFT_04877 at 21.475 kb on + strand at 21.480 kb on - strand at 21.767 kb on - strand, within H281DRAFT_04878 at 21.965 kb on - strand at 22.002 kb on - strand at 22.232 kb on + strand at 22.372 kb on + strand, within H281DRAFT_04879 at 22.457 kb on + strand, within H281DRAFT_04879 at 22.647 kb on + strand at 22.790 kb on - strand, within H281DRAFT_04879 at 22.874 kb on - strand, within H281DRAFT_04879 at 23.025 kb on + strand, within H281DRAFT_04879 at 23.438 kb on + strand, within H281DRAFT_04879 at 23.516 kb on + strand at 23.774 kb on + strand at 23.775 kb on - strand at 23.775 kb on - strand at 23.775 kb on - strand at 23.776 kb on + strand at 24.012 kb on + strand at 24.412 kb on + strand, within H281DRAFT_04880 at 24.412 kb on + strand, within H281DRAFT_04880 at 24.412 kb on + strand, within H281DRAFT_04880
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 21,347 - H281DRAFT_04877 0.88 -2.8 21,475 + +0.1 21,480 - +0.3 21,767 - H281DRAFT_04878 0.55 -0.9 21,965 - +0.3 22,002 - -1.5 22,232 + +0.6 22,372 + H281DRAFT_04879 0.12 -0.1 22,457 + H281DRAFT_04879 0.18 -0.1 22,647 + +0.1 22,790 - H281DRAFT_04879 0.42 +0.1 22,874 - H281DRAFT_04879 0.48 +1.0 23,025 + H281DRAFT_04879 0.59 +1.0 23,438 + H281DRAFT_04879 0.89 +0.6 23,516 + -0.9 23,774 + -1.7 23,775 - -2.6 23,775 - -0.4 23,775 - -2.3 23,776 + +1.4 24,012 + +1.0 24,412 + H281DRAFT_04880 0.36 +1.4 24,412 + H281DRAFT_04880 0.36 +0.1 24,412 + H281DRAFT_04880 0.36 +1.4
Or see this region's nucleotide sequence