Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04850 and H281DRAFT_04851 are separated by 5 nucleotides H281DRAFT_04851 and H281DRAFT_04852 are separated by 392 nucleotides
H281DRAFT_04850: H281DRAFT_04850 - UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase, at 292,410 to 293,435
_04850
H281DRAFT_04851: H281DRAFT_04851 - NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC, at 293,441 to 295,324
_04851
H281DRAFT_04852: H281DRAFT_04852 - hypothetical protein, at 295,717 to 297,549
_04852
Position (kb) 293
294
295
296 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 293.148 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.263 kb on - strand, within H281DRAFT_04850 at 293.431 kb on + strand at 293.431 kb on + strand at 293.431 kb on + strand at 293.526 kb on - strand at 293.636 kb on + strand, within H281DRAFT_04851 at 293.843 kb on + strand, within H281DRAFT_04851 at 293.974 kb on + strand, within H281DRAFT_04851 at 294.005 kb on + strand, within H281DRAFT_04851 at 294.066 kb on - strand, within H281DRAFT_04851 at 294.348 kb on + strand, within H281DRAFT_04851 at 294.431 kb on + strand, within H281DRAFT_04851 at 294.486 kb on + strand, within H281DRAFT_04851 at 294.506 kb on + strand, within H281DRAFT_04851 at 294.539 kb on + strand, within H281DRAFT_04851 at 294.540 kb on - strand, within H281DRAFT_04851 at 294.608 kb on + strand, within H281DRAFT_04851 at 294.609 kb on - strand, within H281DRAFT_04851 at 295.028 kb on - strand, within H281DRAFT_04851 at 295.322 kb on + strand at 295.322 kb on + strand at 295.322 kb on + strand at 295.323 kb on - strand at 295.323 kb on - strand at 295.434 kb on - strand at 295.434 kb on - strand at 295.434 kb on - strand at 295.434 kb on - strand at 295.434 kb on - strand at 295.456 kb on - strand at 295.463 kb on - strand at 295.463 kb on - strand at 295.538 kb on - strand at 295.538 kb on - strand at 295.605 kb on - strand at 295.746 kb on - strand at 295.802 kb on + strand at 295.803 kb on - strand at 295.822 kb on + strand at 295.822 kb on + strand at 295.822 kb on + strand at 295.823 kb on - strand at 295.867 kb on + strand at 295.867 kb on + strand at 295.868 kb on - strand at 295.870 kb on - strand at 295.933 kb on + strand, within H281DRAFT_04852 at 295.980 kb on - strand, within H281DRAFT_04852 at 295.980 kb on - strand, within H281DRAFT_04852 at 296.014 kb on + strand, within H281DRAFT_04852 at 296.014 kb on + strand, within H281DRAFT_04852 at 296.028 kb on + strand, within H281DRAFT_04852 at 296.029 kb on - strand, within H281DRAFT_04852 at 296.088 kb on + strand, within H281DRAFT_04852 at 296.088 kb on + strand, within H281DRAFT_04852 at 296.089 kb on - strand, within H281DRAFT_04852 at 296.092 kb on + strand, within H281DRAFT_04852 at 296.092 kb on + strand, within H281DRAFT_04852 at 296.092 kb on + strand, within H281DRAFT_04852 at 296.092 kb on + strand, within H281DRAFT_04852 at 296.093 kb on - strand, within H281DRAFT_04852 at 296.093 kb on - strand, within H281DRAFT_04852 at 296.093 kb on - strand, within H281DRAFT_04852 at 296.190 kb on + strand, within H281DRAFT_04852 at 296.190 kb on + strand, within H281DRAFT_04852 at 296.192 kb on + strand, within H281DRAFT_04852 at 296.193 kb on - strand, within H281DRAFT_04852 at 296.193 kb on - strand, within H281DRAFT_04852
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 293,148 - H281DRAFT_04850 0.72 -0.3 293,209 - H281DRAFT_04850 0.78 +2.7 293,209 - H281DRAFT_04850 0.78 +2.2 293,209 - H281DRAFT_04850 0.78 +1.1 293,263 - H281DRAFT_04850 0.83 +1.6 293,431 + +0.8 293,431 + +0.4 293,431 + -0.7 293,526 - +1.0 293,636 + H281DRAFT_04851 0.10 +3.2 293,843 + H281DRAFT_04851 0.21 +2.2 293,974 + H281DRAFT_04851 0.28 +1.5 294,005 + H281DRAFT_04851 0.30 +2.4 294,066 - H281DRAFT_04851 0.33 +1.7 294,348 + H281DRAFT_04851 0.48 +1.2 294,431 + H281DRAFT_04851 0.53 +2.6 294,486 + H281DRAFT_04851 0.55 +1.3 294,506 + H281DRAFT_04851 0.57 +1.3 294,539 + H281DRAFT_04851 0.58 +1.1 294,540 - H281DRAFT_04851 0.58 +1.6 294,608 + H281DRAFT_04851 0.62 +1.6 294,609 - H281DRAFT_04851 0.62 +1.6 295,028 - H281DRAFT_04851 0.84 +2.3 295,322 + +1.1 295,322 + -0.2 295,322 + +2.7 295,323 - +0.8 295,323 - -1.0 295,434 - -0.2 295,434 - +0.2 295,434 - +0.0 295,434 - +0.2 295,434 - +0.6 295,456 - -0.3 295,463 - -0.2 295,463 - +0.3 295,538 - -0.4 295,538 - -0.3 295,605 - +0.5 295,746 - +1.1 295,802 + +0.1 295,803 - +0.7 295,822 + +1.4 295,822 + +1.0 295,822 + +0.4 295,823 - -1.3 295,867 + -0.2 295,867 + -0.8 295,868 - +1.6 295,870 - +0.6 295,933 + H281DRAFT_04852 0.12 +0.0 295,980 - H281DRAFT_04852 0.14 -0.5 295,980 - H281DRAFT_04852 0.14 -0.5 296,014 + H281DRAFT_04852 0.16 +1.5 296,014 + H281DRAFT_04852 0.16 +0.4 296,028 + H281DRAFT_04852 0.17 -1.3 296,029 - H281DRAFT_04852 0.17 -0.9 296,088 + H281DRAFT_04852 0.20 +0.6 296,088 + H281DRAFT_04852 0.20 -0.2 296,089 - H281DRAFT_04852 0.20 +0.4 296,092 + H281DRAFT_04852 0.20 +0.8 296,092 + H281DRAFT_04852 0.20 +0.1 296,092 + H281DRAFT_04852 0.20 -0.9 296,092 + H281DRAFT_04852 0.20 +0.7 296,093 - H281DRAFT_04852 0.21 +0.3 296,093 - H281DRAFT_04852 0.21 -0.1 296,093 - H281DRAFT_04852 0.21 +1.7 296,190 + H281DRAFT_04852 0.26 -0.0 296,190 + H281DRAFT_04852 0.26 +1.0 296,192 + H281DRAFT_04852 0.26 -1.9 296,193 - H281DRAFT_04852 0.26 -0.8 296,193 - H281DRAFT_04852 0.26 -0.3
Or see this region's nucleotide sequence