Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04848 and H281DRAFT_04849 overlap by 4 nucleotides H281DRAFT_04849 and H281DRAFT_04850 are separated by 14 nucleotides H281DRAFT_04850 and H281DRAFT_04851 are separated by 5 nucleotides
H281DRAFT_04848: H281DRAFT_04848 - hypothetical protein, at 290,597 to 291,442
_04848
H281DRAFT_04849: H281DRAFT_04849 - UDP-glucose 4-epimerase, at 291,439 to 292,395
_04849
H281DRAFT_04850: H281DRAFT_04850 - UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase, at 292,410 to 293,435
_04850
H281DRAFT_04851: H281DRAFT_04851 - NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC, at 293,441 to 295,324
_04851
Position (kb) 292
293
294 Strain fitness (log2 ratio) -1
0
1
2
3 at 291.933 kb on - strand, within H281DRAFT_04849 at 291.956 kb on - strand, within H281DRAFT_04849 at 292.058 kb on - strand, within H281DRAFT_04849 at 293.148 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.209 kb on - strand, within H281DRAFT_04850 at 293.263 kb on - strand, within H281DRAFT_04850 at 293.431 kb on + strand at 293.431 kb on + strand at 293.431 kb on + strand at 293.526 kb on - strand at 293.636 kb on + strand, within H281DRAFT_04851 at 293.843 kb on + strand, within H281DRAFT_04851 at 293.974 kb on + strand, within H281DRAFT_04851 at 294.005 kb on + strand, within H281DRAFT_04851 at 294.066 kb on - strand, within H281DRAFT_04851 at 294.348 kb on + strand, within H281DRAFT_04851 at 294.431 kb on + strand, within H281DRAFT_04851
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 291,933 - H281DRAFT_04849 0.52 +1.7 291,956 - H281DRAFT_04849 0.54 +2.3 292,058 - H281DRAFT_04849 0.65 +2.4 293,148 - H281DRAFT_04850 0.72 -0.3 293,209 - H281DRAFT_04850 0.78 +2.7 293,209 - H281DRAFT_04850 0.78 +2.2 293,209 - H281DRAFT_04850 0.78 +1.1 293,263 - H281DRAFT_04850 0.83 +1.6 293,431 + +0.8 293,431 + +0.4 293,431 + -0.7 293,526 - +1.0 293,636 + H281DRAFT_04851 0.10 +3.2 293,843 + H281DRAFT_04851 0.21 +2.2 293,974 + H281DRAFT_04851 0.28 +1.5 294,005 + H281DRAFT_04851 0.30 +2.4 294,066 - H281DRAFT_04851 0.33 +1.7 294,348 + H281DRAFT_04851 0.48 +1.2 294,431 + H281DRAFT_04851 0.53 +2.6
Or see this region's nucleotide sequence