Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04734 and H281DRAFT_04735 are separated by 139 nucleotides H281DRAFT_04735 and H281DRAFT_04736 are separated by 342 nucleotides H281DRAFT_04736 and H281DRAFT_04737 are separated by 177 nucleotides
H281DRAFT_04734: H281DRAFT_04734 - Uncharacterized membrane protein YqjE, at 142,720 to 143,106
_04734
H281DRAFT_04735: H281DRAFT_04735 - Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family, at 143,246 to 143,548
_04735
H281DRAFT_04736: H281DRAFT_04736 - Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin), at 143,891 to 144,529
_04736
H281DRAFT_04737: H281DRAFT_04737 - glutaryl-CoA dehydrogenase, at 144,707 to 145,897
_04737
Position (kb)
143
144
145 Strain fitness (log2 ratio)
-1
0
1
2
3 at 143.070 kb on + strand at 143.070 kb on + strand at 143.074 kb on + strand at 143.074 kb on + strand at 143.075 kb on - strand at 143.165 kb on - strand at 143.219 kb on + strand at 143.219 kb on + strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.328 kb on + strand, within H281DRAFT_04735 at 143.329 kb on - strand, within H281DRAFT_04735 at 143.710 kb on - strand at 143.710 kb on - strand at 143.749 kb on + strand at 143.776 kb on + strand at 143.776 kb on + strand at 143.781 kb on + strand at 143.781 kb on + strand at 143.782 kb on - strand at 143.807 kb on + strand at 143.808 kb on - strand at 143.822 kb on - strand at 143.828 kb on + strand at 143.828 kb on + strand at 143.828 kb on + strand at 143.829 kb on - strand at 143.829 kb on - strand at 143.874 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.878 kb on + strand at 143.879 kb on - strand at 143.879 kb on - strand at 143.898 kb on + strand at 143.941 kb on + strand at 144.014 kb on - strand, within H281DRAFT_04736 at 144.213 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.302 kb on - strand, within H281DRAFT_04736 at 144.305 kb on + strand, within H281DRAFT_04736 at 144.349 kb on - strand, within H281DRAFT_04736 at 144.349 kb on - strand, within H281DRAFT_04736 at 144.480 kb on - strand at 144.497 kb on + strand at 144.497 kb on + strand at 144.498 kb on - strand at 144.527 kb on + strand at 144.527 kb on + strand at 144.527 kb on + strand at 144.528 kb on - strand at 144.609 kb on - strand at 144.778 kb on - strand at 144.778 kb on - strand at 144.949 kb on + strand, within H281DRAFT_04737 at 144.950 kb on - strand, within H281DRAFT_04737 at 144.985 kb on + strand, within H281DRAFT_04737 at 145.057 kb on + strand, within H281DRAFT_04737 at 145.072 kb on - strand, within H281DRAFT_04737 at 145.132 kb on - strand, within H281DRAFT_04737 at 145.261 kb on + strand, within H281DRAFT_04737 at 145.261 kb on + strand, within H281DRAFT_04737 at 145.471 kb on + strand, within H281DRAFT_04737 at 145.472 kb on - strand, within H281DRAFT_04737 at 145.527 kb on + strand at 145.527 kb on + strand, within H281DRAFT_04737
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 143,070 + +2.1 143,070 + +1.1 143,074 + +1.4 143,074 + +3.2 143,075 - +1.0 143,165 - +0.8 143,219 + +1.7 143,219 + +0.9 143,248 - +1.8 143,248 - +1.0 143,248 - +1.2 143,248 - +0.7 143,328 + H281DRAFT_04735 0.27 +2.1 143,329 - H281DRAFT_04735 0.27 +0.8 143,710 - +0.4 143,710 - +0.3 143,749 + +1.1 143,776 + +0.3 143,776 + +1.2 143,781 + +0.4 143,781 + +0.9 143,782 - +0.0 143,807 + +0.5 143,808 - -0.6 143,822 - +2.4 143,828 + +2.4 143,828 + -0.3 143,828 + +0.9 143,829 - -1.7 143,829 - -1.2 143,874 + -1.0 143,878 + -0.5 143,878 + +0.2 143,878 + +0.1 143,879 - -1.1 143,879 - -1.5 143,898 + -0.8 143,941 + +0.3 144,014 - H281DRAFT_04736 0.19 -0.2 144,213 - H281DRAFT_04736 0.50 -1.0 144,302 - H281DRAFT_04736 0.64 +1.8 144,302 - H281DRAFT_04736 0.64 +0.1 144,302 - H281DRAFT_04736 0.64 +0.2 144,305 + H281DRAFT_04736 0.65 +0.4 144,349 - H281DRAFT_04736 0.72 -0.3 144,349 - H281DRAFT_04736 0.72 -0.1 144,480 - +0.3 144,497 + -0.4 144,497 + +0.7 144,498 - -0.8 144,527 + +0.4 144,527 + -1.5 144,527 + +0.2 144,528 - +0.2 144,609 - -0.1 144,778 - -0.4 144,778 - +1.7 144,949 + H281DRAFT_04737 0.20 +0.5 144,950 - H281DRAFT_04737 0.20 -0.8 144,985 + H281DRAFT_04737 0.23 +0.8 145,057 + H281DRAFT_04737 0.29 +0.1 145,072 - H281DRAFT_04737 0.31 -0.3 145,132 - H281DRAFT_04737 0.36 +1.0 145,261 + H281DRAFT_04737 0.47 -1.2 145,261 + H281DRAFT_04737 0.47 +0.1 145,471 + H281DRAFT_04737 0.64 +0.1 145,472 - H281DRAFT_04737 0.64 -0.3 145,527 + +0.5 145,527 + H281DRAFT_04737 0.69 -0.0
Or see this region's nucleotide sequence