Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04731 and H281DRAFT_04732 are separated by 10 nucleotides H281DRAFT_04732 and H281DRAFT_04733 are separated by 101 nucleotides H281DRAFT_04733 and H281DRAFT_04734 are separated by 173 nucleotides H281DRAFT_04734 and H281DRAFT_04735 are separated by 139 nucleotides
H281DRAFT_04731: H281DRAFT_04731 - hypothetical protein, at 140,897 to 141,529
_04731
H281DRAFT_04732: H281DRAFT_04732 - type IV pilus assembly protein PilE, at 141,540 to 141,971
_04732
H281DRAFT_04733: H281DRAFT_04733 - Protein of unknown function (DUF3318), at 142,073 to 142,546
_04733
H281DRAFT_04734: H281DRAFT_04734 - Uncharacterized membrane protein YqjE, at 142,720 to 143,106
_04734
H281DRAFT_04735: H281DRAFT_04735 - Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family, at 143,246 to 143,548
_04735
Position (kb) 142
143 Strain fitness (log2 ratio) -1
0
1
2
3 at 141.292 kb on + strand, within H281DRAFT_04731 at 141.293 kb on - strand, within H281DRAFT_04731 at 141.293 kb on - strand, within H281DRAFT_04731 at 141.404 kb on + strand, within H281DRAFT_04731 at 141.405 kb on - strand, within H281DRAFT_04731 at 141.450 kb on + strand, within H281DRAFT_04731 at 141.451 kb on - strand, within H281DRAFT_04731 at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.537 kb on + strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.538 kb on - strand at 141.557 kb on - strand at 141.557 kb on - strand at 141.634 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.794 kb on - strand, within H281DRAFT_04732 at 141.912 kb on - strand, within H281DRAFT_04732 at 141.979 kb on + strand at 141.980 kb on - strand at 142.104 kb on + strand at 142.104 kb on + strand at 142.105 kb on - strand at 142.315 kb on + strand, within H281DRAFT_04733 at 142.464 kb on - strand, within H281DRAFT_04733 at 142.561 kb on - strand at 142.561 kb on - strand at 142.650 kb on + strand at 142.650 kb on + strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.651 kb on - strand at 142.722 kb on - strand at 142.728 kb on + strand at 142.728 kb on + strand at 142.729 kb on - strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.735 kb on + strand at 142.877 kb on + strand, within H281DRAFT_04734 at 142.877 kb on + strand, within H281DRAFT_04734 at 142.878 kb on - strand, within H281DRAFT_04734 at 143.070 kb on + strand at 143.070 kb on + strand at 143.074 kb on + strand at 143.074 kb on + strand at 143.075 kb on - strand at 143.165 kb on - strand at 143.219 kb on + strand at 143.219 kb on + strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.248 kb on - strand at 143.328 kb on + strand, within H281DRAFT_04735 at 143.329 kb on - strand, within H281DRAFT_04735
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 141,292 + H281DRAFT_04731 0.62 -0.4 141,293 - H281DRAFT_04731 0.63 +0.5 141,293 - H281DRAFT_04731 0.63 +0.0 141,404 + H281DRAFT_04731 0.80 -0.9 141,405 - H281DRAFT_04731 0.80 +0.2 141,450 + H281DRAFT_04731 0.87 -0.7 141,451 - H281DRAFT_04731 0.88 -0.9 141,537 + +0.4 141,537 + +2.3 141,537 + +0.8 141,537 + -0.0 141,537 + -0.4 141,538 - -0.1 141,538 - +0.3 141,538 - -0.3 141,538 - +1.1 141,538 - -0.1 141,538 - +0.1 141,538 - +0.2 141,538 - -1.1 141,557 - +0.6 141,557 - +0.5 141,634 - H281DRAFT_04732 0.22 -0.5 141,794 - H281DRAFT_04732 0.59 +0.6 141,794 - H281DRAFT_04732 0.59 -0.4 141,794 - H281DRAFT_04732 0.59 +0.2 141,794 - H281DRAFT_04732 0.59 +0.2 141,794 - H281DRAFT_04732 0.59 +0.1 141,794 - H281DRAFT_04732 0.59 -0.6 141,794 - H281DRAFT_04732 0.59 +2.1 141,794 - H281DRAFT_04732 0.59 +0.2 141,912 - H281DRAFT_04732 0.86 -0.3 141,979 + +0.7 141,980 - -0.4 142,104 + +1.7 142,104 + -0.2 142,105 - +0.2 142,315 + H281DRAFT_04733 0.51 +1.3 142,464 - H281DRAFT_04733 0.82 +0.9 142,561 - -0.2 142,561 - -0.0 142,650 + +0.9 142,650 + +0.9 142,651 - +0.1 142,651 - -0.2 142,651 - +0.2 142,722 - +0.2 142,728 + +1.4 142,728 + +2.3 142,729 - -1.3 142,735 + +2.1 142,735 + +1.0 142,735 + +2.3 142,735 + +1.7 142,735 + +0.7 142,877 + H281DRAFT_04734 0.41 +1.9 142,877 + H281DRAFT_04734 0.41 +1.1 142,878 - H281DRAFT_04734 0.41 +1.6 143,070 + +2.1 143,070 + +1.1 143,074 + +1.4 143,074 + +3.2 143,075 - +1.0 143,165 - +0.8 143,219 + +1.7 143,219 + +0.9 143,248 - +1.8 143,248 - +1.0 143,248 - +1.2 143,248 - +0.7 143,328 + H281DRAFT_04735 0.27 +2.1 143,329 - H281DRAFT_04735 0.27 +0.8
Or see this region's nucleotide sequence