Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04524 and H281DRAFT_04525 are separated by 98 nucleotides H281DRAFT_04525 and H281DRAFT_04526 are separated by 63 nucleotides H281DRAFT_04526 and H281DRAFT_04527 are separated by 213 nucleotides H281DRAFT_04527 and H281DRAFT_04528 overlap by 4 nucleotides H281DRAFT_04528 and H281DRAFT_04529 overlap by 4 nucleotides
H281DRAFT_04524: H281DRAFT_04524 - 3-oxoacyl-[acyl-carrier protein] reductase, at 256,161 to 256,940
_04524
H281DRAFT_04525: H281DRAFT_04525 - methylglyoxal synthase, at 257,039 to 257,428
_04525
H281DRAFT_04526: H281DRAFT_04526 - NADPH2:quinone reductase, at 257,492 to 258,466
_04526
H281DRAFT_04527: H281DRAFT_04527 - hypothetical protein, at 258,680 to 258,793
_04527
H281DRAFT_04528: H281DRAFT_04528 - K+-transporting ATPase, KdpF subunit, at 258,790 to 258,882
_04528
H281DRAFT_04529: H281DRAFT_04529 - K+-transporting ATPase ATPase A chain, at 258,879 to 260,684
_04529
Position (kb) 257
258
259 Strain fitness (log2 ratio) -2
-1
0
1
2 at 256.884 kb on + strand at 256.885 kb on - strand at 256.885 kb on - strand at 256.939 kb on - strand at 256.947 kb on - strand at 256.956 kb on + strand at 257.033 kb on + strand at 257.033 kb on + strand at 257.033 kb on + strand at 257.033 kb on + strand at 257.033 kb on + strand at 257.034 kb on - strand at 257.344 kb on - strand, within H281DRAFT_04525 at 257.615 kb on + strand, within H281DRAFT_04526 at 257.615 kb on + strand, within H281DRAFT_04526 at 257.615 kb on + strand, within H281DRAFT_04526 at 257.615 kb on + strand, within H281DRAFT_04526 at 257.616 kb on - strand, within H281DRAFT_04526 at 257.617 kb on + strand, within H281DRAFT_04526 at 257.628 kb on - strand, within H281DRAFT_04526 at 257.644 kb on - strand, within H281DRAFT_04526 at 257.747 kb on + strand, within H281DRAFT_04526 at 257.748 kb on - strand, within H281DRAFT_04526 at 257.771 kb on + strand, within H281DRAFT_04526 at 257.876 kb on + strand, within H281DRAFT_04526 at 257.895 kb on - strand, within H281DRAFT_04526 at 258.062 kb on + strand, within H281DRAFT_04526 at 258.062 kb on + strand, within H281DRAFT_04526 at 258.063 kb on - strand, within H281DRAFT_04526 at 258.065 kb on - strand, within H281DRAFT_04526 at 258.065 kb on - strand, within H281DRAFT_04526 at 258.148 kb on + strand, within H281DRAFT_04526 at 258.148 kb on + strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.294 kb on - strand, within H281DRAFT_04526 at 258.402 kb on + strand at 258.516 kb on - strand at 258.639 kb on + strand at 258.890 kb on + strand at 259.072 kb on - strand, within H281DRAFT_04529 at 259.240 kb on - strand, within H281DRAFT_04529 at 259.413 kb on + strand, within H281DRAFT_04529
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 256,884 + +0.4 256,885 - +0.1 256,885 - +0.6 256,939 - +1.7 256,947 - +0.2 256,956 + +0.7 257,033 + +0.2 257,033 + +1.1 257,033 + +0.6 257,033 + -0.0 257,033 + +0.5 257,034 - -1.6 257,344 - H281DRAFT_04525 0.78 +1.3 257,615 + H281DRAFT_04526 0.13 -0.4 257,615 + H281DRAFT_04526 0.13 +0.6 257,615 + H281DRAFT_04526 0.13 +0.3 257,615 + H281DRAFT_04526 0.13 -1.1 257,616 - H281DRAFT_04526 0.13 -0.6 257,617 + H281DRAFT_04526 0.13 +2.0 257,628 - H281DRAFT_04526 0.14 +0.1 257,644 - H281DRAFT_04526 0.16 -2.6 257,747 + H281DRAFT_04526 0.26 +0.5 257,748 - H281DRAFT_04526 0.26 -0.7 257,771 + H281DRAFT_04526 0.29 -1.0 257,876 + H281DRAFT_04526 0.39 -0.3 257,895 - H281DRAFT_04526 0.41 +1.2 258,062 + H281DRAFT_04526 0.58 -1.4 258,062 + H281DRAFT_04526 0.58 -0.2 258,063 - H281DRAFT_04526 0.59 -0.1 258,065 - H281DRAFT_04526 0.59 -0.4 258,065 - H281DRAFT_04526 0.59 -0.2 258,148 + H281DRAFT_04526 0.67 +0.4 258,148 + H281DRAFT_04526 0.67 -0.4 258,294 - H281DRAFT_04526 0.82 -0.6 258,294 - H281DRAFT_04526 0.82 +0.9 258,294 - H281DRAFT_04526 0.82 -0.2 258,402 + +0.2 258,516 - +0.3 258,639 + +0.4 258,890 + -1.4 259,072 - H281DRAFT_04529 0.11 -1.2 259,240 - H281DRAFT_04529 0.20 -0.3 259,413 + H281DRAFT_04529 0.30 +0.2
Or see this region's nucleotide sequence