Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04474 and H281DRAFT_04475 are separated by 203 nucleotides H281DRAFT_04475 and H281DRAFT_04476 are separated by 11 nucleotides
H281DRAFT_04474: H281DRAFT_04474 - RND family efflux transporter, MFP subunit, at 203,759 to 204,619
_04474
H281DRAFT_04475: H281DRAFT_04475 - Uncharacterized membrane protein YccC, at 204,823 to 207,033
_04475
H281DRAFT_04476: H281DRAFT_04476 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 207,045 to 208,709
_04476
Position (kb) 204
205
206
207
208 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 203.928 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.039 kb on + strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.046 kb on - strand, within H281DRAFT_04474 at 204.136 kb on - strand, within H281DRAFT_04474 at 204.191 kb on + strand, within H281DRAFT_04474 at 204.378 kb on + strand at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.531 kb on + strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.532 kb on - strand, within H281DRAFT_04474 at 204.578 kb on + strand at 204.579 kb on - strand at 204.802 kb on + strand at 204.932 kb on - strand at 204.932 kb on - strand at 204.932 kb on - strand at 205.125 kb on - strand, within H281DRAFT_04475 at 205.456 kb on - strand, within H281DRAFT_04475 at 205.472 kb on + strand, within H281DRAFT_04475 at 205.637 kb on + strand, within H281DRAFT_04475 at 205.638 kb on - strand, within H281DRAFT_04475 at 205.807 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.934 kb on + strand, within H281DRAFT_04475 at 205.962 kb on - strand, within H281DRAFT_04475 at 206.063 kb on + strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.064 kb on - strand, within H281DRAFT_04475 at 206.157 kb on - strand, within H281DRAFT_04475 at 206.157 kb on - strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.429 kb on + strand, within H281DRAFT_04475 at 206.430 kb on - strand, within H281DRAFT_04475 at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on + strand at 206.933 kb on - strand at 206.934 kb on - strand at 207.440 kb on - strand, within H281DRAFT_04476 at 207.662 kb on + strand, within H281DRAFT_04476 at 208.021 kb on - strand, within H281DRAFT_04476 at 208.021 kb on - strand, within H281DRAFT_04476
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 203,928 + H281DRAFT_04474 0.20 -0.2 204,039 + H281DRAFT_04474 0.33 +0.4 204,039 + H281DRAFT_04474 0.33 -1.3 204,046 - H281DRAFT_04474 0.33 +1.0 204,046 - H281DRAFT_04474 0.33 -0.3 204,046 - H281DRAFT_04474 0.33 -0.6 204,136 - H281DRAFT_04474 0.44 +0.5 204,191 + H281DRAFT_04474 0.50 -3.7 204,378 + +2.8 204,531 + H281DRAFT_04474 0.90 -0.6 204,531 + H281DRAFT_04474 0.90 -0.5 204,531 + H281DRAFT_04474 0.90 +0.9 204,531 + H281DRAFT_04474 0.90 -0.4 204,532 - H281DRAFT_04474 0.90 +1.0 204,532 - H281DRAFT_04474 0.90 -0.9 204,532 - H281DRAFT_04474 0.90 -0.3 204,532 - H281DRAFT_04474 0.90 -0.3 204,578 + +0.3 204,579 - +0.0 204,802 + +0.4 204,932 - +0.6 204,932 - +0.1 204,932 - +0.1 205,125 - H281DRAFT_04475 0.14 -0.4 205,456 - H281DRAFT_04475 0.29 +0.4 205,472 + H281DRAFT_04475 0.29 +0.8 205,637 + H281DRAFT_04475 0.37 +0.3 205,638 - H281DRAFT_04475 0.37 +1.0 205,807 + H281DRAFT_04475 0.45 -0.3 205,934 + H281DRAFT_04475 0.50 +0.4 205,934 + H281DRAFT_04475 0.50 +2.5 205,934 + H281DRAFT_04475 0.50 +0.6 205,962 - H281DRAFT_04475 0.52 -1.3 206,063 + H281DRAFT_04475 0.56 -0.3 206,064 - H281DRAFT_04475 0.56 +0.2 206,064 - H281DRAFT_04475 0.56 +0.8 206,064 - H281DRAFT_04475 0.56 -0.2 206,157 - H281DRAFT_04475 0.60 +0.4 206,157 - H281DRAFT_04475 0.60 -0.3 206,429 + H281DRAFT_04475 0.73 +1.4 206,429 + H281DRAFT_04475 0.73 -1.0 206,429 + H281DRAFT_04475 0.73 +0.9 206,430 - H281DRAFT_04475 0.73 +0.3 206,933 + +2.3 206,933 + -0.2 206,933 + -2.2 206,933 + +0.5 206,933 - +0.5 206,934 - +1.4 207,440 - H281DRAFT_04476 0.24 +0.2 207,662 + H281DRAFT_04476 0.37 +0.6 208,021 - H281DRAFT_04476 0.59 +1.6 208,021 - H281DRAFT_04476 0.59 -1.2
Or see this region's nucleotide sequence