Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04341 and H281DRAFT_04342 overlap by 4 nucleotides H281DRAFT_04342 and H281DRAFT_04343 are separated by 42 nucleotides H281DRAFT_04343 and H281DRAFT_04344 are separated by 93 nucleotides H281DRAFT_04344 and H281DRAFT_04345 overlap by 4 nucleotides
H281DRAFT_04341: H281DRAFT_04341 - phosphoglycolate phosphatase, at 60,588 to 61,247
_04341
H281DRAFT_04342: H281DRAFT_04342 - Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase, at 61,244 to 61,660
_04342
H281DRAFT_04343: H281DRAFT_04343 - protease-4, at 61,703 to 62,707
_04343
H281DRAFT_04344: H281DRAFT_04344 - 16S rRNA (cytidine1402-2'-O)-methyltransferase, at 62,801 to 63,520
_04344
H281DRAFT_04345: H281DRAFT_04345 - septum formation protein, at 63,517 to 64,134
_04345
Position (kb) 61
62
63 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.726 kb on + strand, within H281DRAFT_04341 at 60.727 kb on - strand, within H281DRAFT_04341 at 60.727 kb on - strand, within H281DRAFT_04341 at 60.825 kb on + strand, within H281DRAFT_04341 at 60.825 kb on + strand, within H281DRAFT_04341 at 60.826 kb on - strand, within H281DRAFT_04341 at 60.901 kb on - strand, within H281DRAFT_04341 at 61.149 kb on + strand, within H281DRAFT_04341 at 61.150 kb on - strand, within H281DRAFT_04341 at 61.150 kb on - strand, within H281DRAFT_04341 at 61.194 kb on + strand at 61.194 kb on + strand at 61.194 kb on + strand at 61.194 kb on + strand at 61.194 kb on + strand at 61.195 kb on - strand at 61.195 kb on - strand at 61.195 kb on - strand at 61.279 kb on + strand at 61.280 kb on - strand at 61.413 kb on - strand, within H281DRAFT_04342 at 61.413 kb on - strand at 61.486 kb on - strand, within H281DRAFT_04342 at 61.488 kb on - strand, within H281DRAFT_04342 at 61.585 kb on - strand, within H281DRAFT_04342 at 61.677 kb on + strand at 61.678 kb on - strand at 61.678 kb on - strand at 61.678 kb on - strand at 61.712 kb on - strand at 61.911 kb on + strand, within H281DRAFT_04343 at 61.912 kb on - strand, within H281DRAFT_04343 at 61.912 kb on - strand, within H281DRAFT_04343 at 61.912 kb on - strand, within H281DRAFT_04343 at 62.225 kb on + strand, within H281DRAFT_04343 at 62.226 kb on - strand, within H281DRAFT_04343 at 62.226 kb on - strand, within H281DRAFT_04343 at 62.226 kb on - strand, within H281DRAFT_04343 at 62.226 kb on - strand, within H281DRAFT_04343 at 62.327 kb on - strand, within H281DRAFT_04343 at 62.327 kb on - strand, within H281DRAFT_04343 at 62.342 kb on - strand, within H281DRAFT_04343 at 62.480 kb on - strand, within H281DRAFT_04343 at 62.523 kb on + strand, within H281DRAFT_04343 at 62.524 kb on - strand, within H281DRAFT_04343 at 62.524 kb on - strand, within H281DRAFT_04343 at 62.524 kb on - strand, within H281DRAFT_04343 at 62.814 kb on - strand at 62.836 kb on + strand at 62.836 kb on + strand at 63.084 kb on + strand, within H281DRAFT_04344 at 63.084 kb on + strand, within H281DRAFT_04344 at 63.084 kb on + strand, within H281DRAFT_04344 at 63.084 kb on + strand, within H281DRAFT_04344 at 63.085 kb on - strand, within H281DRAFT_04344 at 63.085 kb on - strand, within H281DRAFT_04344 at 63.362 kb on + strand, within H281DRAFT_04344 at 63.362 kb on + strand, within H281DRAFT_04344 at 63.362 kb on + strand, within H281DRAFT_04344 at 63.363 kb on - strand, within H281DRAFT_04344 at 63.408 kb on + strand, within H281DRAFT_04344 at 63.409 kb on - strand, within H281DRAFT_04344 at 63.409 kb on - strand, within H281DRAFT_04344 at 63.409 kb on - strand, within H281DRAFT_04344 at 63.409 kb on - strand, within H281DRAFT_04344 at 63.491 kb on - strand at 63.491 kb on - strand at 63.504 kb on + strand at 63.504 kb on + strand at 63.504 kb on + strand at 63.505 kb on - strand at 63.532 kb on + strand at 63.671 kb on + strand, within H281DRAFT_04345 at 63.671 kb on + strand, within H281DRAFT_04345 at 63.693 kb on - strand, within H281DRAFT_04345 at 63.693 kb on - strand, within H281DRAFT_04345 at 63.693 kb on - strand, within H281DRAFT_04345 at 63.693 kb on - strand, within H281DRAFT_04345 at 63.693 kb on - strand, within H281DRAFT_04345
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 60,726 + H281DRAFT_04341 0.21 +2.2 60,726 + H281DRAFT_04341 0.21 -0.2 60,726 + H281DRAFT_04341 0.21 -0.5 60,726 + H281DRAFT_04341 0.21 -0.7 60,726 + H281DRAFT_04341 0.21 -1.7 60,726 + H281DRAFT_04341 0.21 +0.2 60,726 + H281DRAFT_04341 0.21 -0.3 60,726 + H281DRAFT_04341 0.21 -1.5 60,727 - H281DRAFT_04341 0.21 +0.9 60,727 - H281DRAFT_04341 0.21 +0.3 60,825 + H281DRAFT_04341 0.36 +0.3 60,825 + H281DRAFT_04341 0.36 -0.9 60,826 - H281DRAFT_04341 0.36 -1.2 60,901 - H281DRAFT_04341 0.47 -0.3 61,149 + H281DRAFT_04341 0.85 +0.6 61,150 - H281DRAFT_04341 0.85 -0.2 61,150 - H281DRAFT_04341 0.85 -2.4 61,194 + +0.1 61,194 + -0.5 61,194 + +0.2 61,194 + -0.3 61,194 + -0.5 61,195 - +1.0 61,195 - -1.6 61,195 - -0.1 61,279 + -0.2 61,280 - -1.4 61,413 - H281DRAFT_04342 0.41 -0.3 61,413 - +1.0 61,486 - H281DRAFT_04342 0.58 -0.1 61,488 - H281DRAFT_04342 0.59 +0.2 61,585 - H281DRAFT_04342 0.82 -0.7 61,677 + +0.3 61,678 - +0.9 61,678 - -2.0 61,678 - +0.3 61,712 - +1.1 61,911 + H281DRAFT_04343 0.21 +1.1 61,912 - H281DRAFT_04343 0.21 -0.7 61,912 - H281DRAFT_04343 0.21 +0.3 61,912 - H281DRAFT_04343 0.21 +0.5 62,225 + H281DRAFT_04343 0.52 +0.8 62,226 - H281DRAFT_04343 0.52 +0.8 62,226 - H281DRAFT_04343 0.52 -0.1 62,226 - H281DRAFT_04343 0.52 -0.3 62,226 - H281DRAFT_04343 0.52 +1.2 62,327 - H281DRAFT_04343 0.62 +1.6 62,327 - H281DRAFT_04343 0.62 +1.8 62,342 - H281DRAFT_04343 0.64 +1.0 62,480 - H281DRAFT_04343 0.77 -2.6 62,523 + H281DRAFT_04343 0.82 +0.3 62,524 - H281DRAFT_04343 0.82 +0.3 62,524 - H281DRAFT_04343 0.82 -0.3 62,524 - H281DRAFT_04343 0.82 +0.1 62,814 - -1.0 62,836 + +0.3 62,836 + -0.5 63,084 + H281DRAFT_04344 0.39 -0.0 63,084 + H281DRAFT_04344 0.39 -0.5 63,084 + H281DRAFT_04344 0.39 +0.2 63,084 + H281DRAFT_04344 0.39 +0.1 63,085 - H281DRAFT_04344 0.39 +0.9 63,085 - H281DRAFT_04344 0.39 +0.2 63,362 + H281DRAFT_04344 0.78 +0.3 63,362 + H281DRAFT_04344 0.78 +0.5 63,362 + H281DRAFT_04344 0.78 +0.4 63,363 - H281DRAFT_04344 0.78 +0.1 63,408 + H281DRAFT_04344 0.84 -0.3 63,409 - H281DRAFT_04344 0.84 +0.2 63,409 - H281DRAFT_04344 0.84 +0.1 63,409 - H281DRAFT_04344 0.84 +0.3 63,409 - H281DRAFT_04344 0.84 -0.5 63,491 - +0.3 63,491 - +0.7 63,504 + +0.5 63,504 + +1.2 63,504 + +0.3 63,505 - -0.2 63,532 + +0.6 63,671 + H281DRAFT_04345 0.25 +1.2 63,671 + H281DRAFT_04345 0.25 +0.0 63,693 - H281DRAFT_04345 0.28 +0.9 63,693 - H281DRAFT_04345 0.28 +0.6 63,693 - H281DRAFT_04345 0.28 +0.2 63,693 - H281DRAFT_04345 0.28 +3.3 63,693 - H281DRAFT_04345 0.28 +0.1
Or see this region's nucleotide sequence