Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04217 and H281DRAFT_04218 overlap by 4 nucleotides H281DRAFT_04218 and H281DRAFT_04219 are separated by 399 nucleotides H281DRAFT_04219 and H281DRAFT_04220 are separated by 21 nucleotides
H281DRAFT_04217: H281DRAFT_04217 - putative copper resistance protein D, at 336,514 to 337,443
_04217
H281DRAFT_04218: H281DRAFT_04218 - hypothetical protein, at 337,440 to 337,817
_04218
H281DRAFT_04219: H281DRAFT_04219 - Cytochrome c553, at 338,217 to 338,936
_04219
H281DRAFT_04220: H281DRAFT_04220 - Cytochrome c, mono- and diheme variants, at 338,958 to 340,256
_04220
Position (kb) 338
339 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 337.226 kb on + strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.227 kb on - strand, within H281DRAFT_04217 at 337.513 kb on + strand, within H281DRAFT_04218 at 337.751 kb on + strand, within H281DRAFT_04218 at 337.809 kb on + strand at 337.819 kb on + strand at 337.819 kb on + strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.820 kb on - strand at 337.835 kb on + strand at 337.926 kb on + strand at 337.927 kb on - strand at 338.106 kb on + strand at 338.107 kb on - strand at 338.107 kb on - strand at 338.130 kb on - strand at 338.212 kb on + strand at 338.213 kb on - strand at 338.280 kb on + strand at 338.280 kb on + strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.281 kb on - strand at 338.282 kb on + strand at 338.322 kb on - strand, within H281DRAFT_04219 at 338.325 kb on - strand at 338.378 kb on + strand at 338.378 kb on + strand, within H281DRAFT_04219 at 338.424 kb on + strand, within H281DRAFT_04219 at 338.425 kb on - strand, within H281DRAFT_04219 at 338.430 kb on + strand, within H281DRAFT_04219 at 338.431 kb on - strand, within H281DRAFT_04219 at 338.431 kb on - strand, within H281DRAFT_04219 at 338.484 kb on + strand, within H281DRAFT_04219 at 338.485 kb on - strand, within H281DRAFT_04219 at 338.485 kb on - strand, within H281DRAFT_04219 at 338.497 kb on - strand, within H281DRAFT_04219 at 338.511 kb on + strand, within H281DRAFT_04219 at 338.512 kb on - strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.532 kb on + strand, within H281DRAFT_04219 at 338.533 kb on - strand, within H281DRAFT_04219 at 338.533 kb on - strand, within H281DRAFT_04219 at 338.728 kb on - strand, within H281DRAFT_04219 at 339.114 kb on + strand at 339.114 kb on + strand, within H281DRAFT_04220 at 339.115 kb on - strand, within H281DRAFT_04220 at 339.138 kb on - strand, within H281DRAFT_04220 at 339.322 kb on - strand, within H281DRAFT_04220 at 339.346 kb on - strand, within H281DRAFT_04220 at 339.381 kb on + strand, within H281DRAFT_04220 at 339.381 kb on + strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.382 kb on - strand, within H281DRAFT_04220 at 339.504 kb on + strand, within H281DRAFT_04220 at 339.505 kb on - strand, within H281DRAFT_04220 at 339.663 kb on + strand, within H281DRAFT_04220 at 339.807 kb on + strand, within H281DRAFT_04220 at 339.807 kb on + strand, within H281DRAFT_04220 at 339.808 kb on - strand, within H281DRAFT_04220 at 339.808 kb on - strand, within H281DRAFT_04220
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 337,226 + H281DRAFT_04217 0.77 -0.7 337,227 - H281DRAFT_04217 0.77 -0.6 337,227 - H281DRAFT_04217 0.77 +0.0 337,227 - H281DRAFT_04217 0.77 -1.5 337,513 + H281DRAFT_04218 0.19 +0.5 337,751 + H281DRAFT_04218 0.82 +3.3 337,809 + +0.4 337,819 + +0.1 337,819 + -0.5 337,820 - -0.4 337,820 - +0.9 337,820 - +0.5 337,820 - -1.3 337,835 + -0.2 337,926 + -0.6 337,927 - -1.1 338,106 + -0.1 338,107 - -0.4 338,107 - -0.1 338,130 - +0.2 338,212 + -1.0 338,213 - -0.2 338,280 + +0.4 338,280 + -1.3 338,281 - -0.5 338,281 - +0.5 338,281 - -0.5 338,281 - +0.6 338,282 + +0.7 338,322 - H281DRAFT_04219 0.15 -1.5 338,325 - -2.0 338,378 + +0.4 338,378 + H281DRAFT_04219 0.22 -0.8 338,424 + H281DRAFT_04219 0.29 -0.5 338,425 - H281DRAFT_04219 0.29 +1.0 338,430 + H281DRAFT_04219 0.30 -0.6 338,431 - H281DRAFT_04219 0.30 +1.7 338,431 - H281DRAFT_04219 0.30 -1.5 338,484 + H281DRAFT_04219 0.37 -1.8 338,485 - H281DRAFT_04219 0.37 -0.8 338,485 - H281DRAFT_04219 0.37 +0.1 338,497 - H281DRAFT_04219 0.39 -1.9 338,511 + H281DRAFT_04219 0.41 -1.3 338,512 - H281DRAFT_04219 0.41 -0.9 338,532 + H281DRAFT_04219 0.44 -2.4 338,532 + H281DRAFT_04219 0.44 -1.7 338,532 + H281DRAFT_04219 0.44 -0.2 338,533 - H281DRAFT_04219 0.44 +1.4 338,533 - H281DRAFT_04219 0.44 +1.0 338,728 - H281DRAFT_04219 0.71 -0.6 339,114 + +1.0 339,114 + H281DRAFT_04220 0.12 -0.6 339,115 - H281DRAFT_04220 0.12 -1.5 339,138 - H281DRAFT_04220 0.14 -2.8 339,322 - H281DRAFT_04220 0.28 +0.4 339,346 - H281DRAFT_04220 0.30 -0.5 339,381 + H281DRAFT_04220 0.33 -0.6 339,381 + H281DRAFT_04220 0.33 -0.4 339,382 - H281DRAFT_04220 0.33 -1.7 339,382 - H281DRAFT_04220 0.33 +0.2 339,382 - H281DRAFT_04220 0.33 -0.4 339,382 - H281DRAFT_04220 0.33 -0.4 339,504 + H281DRAFT_04220 0.42 -0.6 339,505 - H281DRAFT_04220 0.42 -1.8 339,663 + H281DRAFT_04220 0.54 +0.7 339,807 + H281DRAFT_04220 0.65 -1.1 339,807 + H281DRAFT_04220 0.65 -0.6 339,808 - H281DRAFT_04220 0.65 -1.7 339,808 - H281DRAFT_04220 0.65 -0.3
Or see this region's nucleotide sequence