Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04192 and H281DRAFT_04193 are separated by 283 nucleotides H281DRAFT_04193 and H281DRAFT_04194 are separated by 90 nucleotides H281DRAFT_04194 and H281DRAFT_04195 are separated by 329 nucleotides
H281DRAFT_04192: H281DRAFT_04192 - Predicted branched-chain amino acid permease (azaleucine resistance), at 311,730 to 312,476
_04192
H281DRAFT_04193: H281DRAFT_04193 - branched chain amino acid aminotransferase apoenzyme, at 312,760 to 313,683
_04193
H281DRAFT_04194: H281DRAFT_04194 - Uncharacterized conserved protein, contains Zn-finger domain, at 313,774 to 313,968
_04194
H281DRAFT_04195: H281DRAFT_04195 - heptosyltransferase-2, at 314,298 to 315,323
_04195
Position (kb) 312
313
314 Strain fitness (log2 ratio) -2
-1
0
1
2 at 311.766 kb on + strand at 312.064 kb on + strand, within H281DRAFT_04192 at 312.064 kb on + strand, within H281DRAFT_04192 at 312.065 kb on - strand, within H281DRAFT_04192 at 312.065 kb on - strand, within H281DRAFT_04192 at 312.065 kb on - strand, within H281DRAFT_04192 at 312.065 kb on - strand, within H281DRAFT_04192 at 312.108 kb on + strand, within H281DRAFT_04192 at 312.121 kb on + strand, within H281DRAFT_04192 at 312.121 kb on + strand, within H281DRAFT_04192 at 312.121 kb on + strand, within H281DRAFT_04192 at 312.121 kb on + strand, within H281DRAFT_04192 at 312.121 kb on + strand, within H281DRAFT_04192 at 312.122 kb on - strand, within H281DRAFT_04192 at 312.122 kb on - strand, within H281DRAFT_04192 at 312.122 kb on - strand, within H281DRAFT_04192 at 312.122 kb on - strand, within H281DRAFT_04192 at 312.122 kb on - strand, within H281DRAFT_04192 at 312.143 kb on - strand, within H281DRAFT_04192 at 312.143 kb on - strand, within H281DRAFT_04192 at 312.310 kb on + strand, within H281DRAFT_04192 at 312.419 kb on - strand at 312.456 kb on - strand at 312.456 kb on - strand at 312.565 kb on + strand at 312.565 kb on + strand at 312.565 kb on + strand at 312.565 kb on + strand at 312.565 kb on + strand at 312.565 kb on + strand at 312.566 kb on - strand at 312.566 kb on - strand at 312.631 kb on - strand at 312.675 kb on + strand at 312.734 kb on + strand at 312.759 kb on + strand at 312.759 kb on + strand at 312.759 kb on + strand at 312.759 kb on + strand at 312.760 kb on - strand at 313.150 kb on + strand, within H281DRAFT_04193 at 313.300 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.333 kb on + strand, within H281DRAFT_04193 at 313.387 kb on + strand at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.501 kb on + strand, within H281DRAFT_04193 at 313.503 kb on + strand, within H281DRAFT_04193 at 313.657 kb on + strand at 313.657 kb on + strand at 313.681 kb on + strand at 313.682 kb on - strand at 313.757 kb on + strand at 313.758 kb on - strand at 313.930 kb on + strand, within H281DRAFT_04194 at 314.001 kb on + strand at 314.002 kb on - strand at 314.002 kb on - strand at 314.187 kb on + strand at 314.187 kb on + strand at 314.233 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 311,766 + +1.0 312,064 + H281DRAFT_04192 0.45 +0.1 312,064 + H281DRAFT_04192 0.45 +0.8 312,065 - H281DRAFT_04192 0.45 +1.5 312,065 - H281DRAFT_04192 0.45 -1.0 312,065 - H281DRAFT_04192 0.45 -1.0 312,065 - H281DRAFT_04192 0.45 -0.2 312,108 + H281DRAFT_04192 0.51 +0.6 312,121 + H281DRAFT_04192 0.52 +0.4 312,121 + H281DRAFT_04192 0.52 +0.3 312,121 + H281DRAFT_04192 0.52 -0.8 312,121 + H281DRAFT_04192 0.52 +0.8 312,121 + H281DRAFT_04192 0.52 -0.1 312,122 - H281DRAFT_04192 0.52 +0.1 312,122 - H281DRAFT_04192 0.52 +0.0 312,122 - H281DRAFT_04192 0.52 -0.2 312,122 - H281DRAFT_04192 0.52 -0.3 312,122 - H281DRAFT_04192 0.52 -0.2 312,143 - H281DRAFT_04192 0.55 -0.9 312,143 - H281DRAFT_04192 0.55 -0.7 312,310 + H281DRAFT_04192 0.78 +2.3 312,419 - -0.3 312,456 - -1.1 312,456 - +0.2 312,565 + +0.4 312,565 + +0.8 312,565 + +0.4 312,565 + +0.1 312,565 + +1.2 312,565 + -2.5 312,566 - -1.7 312,566 - +0.2 312,631 - -0.5 312,675 + +0.1 312,734 + +0.1 312,759 + +0.7 312,759 + -0.5 312,759 + +0.2 312,759 + -0.1 312,760 - +2.2 313,150 + H281DRAFT_04193 0.42 -0.9 313,300 + H281DRAFT_04193 0.58 +0.3 313,333 + H281DRAFT_04193 0.62 -1.3 313,333 + H281DRAFT_04193 0.62 -0.0 313,387 + +2.0 313,501 + H281DRAFT_04193 0.80 -0.8 313,501 + H281DRAFT_04193 0.80 -0.2 313,501 + H281DRAFT_04193 0.80 +1.3 313,501 + H281DRAFT_04193 0.80 -0.4 313,501 + H281DRAFT_04193 0.80 +0.4 313,501 + H281DRAFT_04193 0.80 +0.9 313,501 + H281DRAFT_04193 0.80 -0.4 313,501 + H281DRAFT_04193 0.80 +0.1 313,503 + H281DRAFT_04193 0.80 +0.0 313,657 + -0.8 313,657 + +1.3 313,681 + -0.1 313,682 - +0.2 313,757 + -0.3 313,758 - +1.2 313,930 + H281DRAFT_04194 0.80 +0.9 314,001 + +1.3 314,002 - -0.4 314,002 - -1.2 314,187 + +0.1 314,187 + +0.8 314,233 + +1.4
Or see this region's nucleotide sequence